Evidence map›Paper›PMID 12853652›Full record

ArticleNucleic acids research2003

Heteromeric MAPPIT: a novel strategy to study modification-dependent protein-protein interactions in mammalian cells.

Irma Lemmens, Sven Eyckerman, Lennart Zabeau, Dominiek Catteeuw, Els Vertenten, Kristin Verschueren, Danny Huylebroeck, Joël Vandekerckhove, Jan Tavernier

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Irma LemmensDepartment of Medical Protein Research VIB09, Faculty of Medicine and Health Sciences, Ghent University, Albert Baertsoenkaai 3, B-9000 Ghent, Belgium.
Sven Eyckerman
Lennart Zabeau
Dominiek Catteeuw
Els Vertenten
Kristin Verschueren
Danny Huylebroeck
Joël Vandekerckhove
Jan Tavernier
Ghent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We recently reported a two-hybrid trap for detecting protein-protein interactions in intact mammalian cells (MAPPIT). The bait protein was fused to a STAT recruitment-deficient, homodimeric cytokine receptor and the prey protein to functional STAT recruitment sites. In such a configuration, STAT-dependent responses can be used to monitor a given bait-prey interaction. Using this system, we were able to demonstrate both modification-independent and tyrosine phosphorylation- dependent interactions. Protein modification in this approach is, however, strictly dependent on the receptor-associated JAK tyrosine kinases. We have now extended this concept by using extracellular domains of the heteromeric granulocyte/macrophage colony-stimulating factor receptor (GM-CSFR). Herein, the bait was fused to the (beta)c chain and its modifying enzyme to the GM-CSFRalpha chain (or vice versa). We demonstrate several serine phosphorylation-dependent interactions in the TGFbeta/Smad pathway using the catalytic domains of the ALK4 or ALK6 serine/threonine kinase receptors. In all cases tested, STAT-dependent signaling was completely abolished when mutant baits were used wherein critical serine residues were replaced by alanines. This approach operates both in transient and stable expression systems and may not be limited to serine phosphorylation but has the potential for studying various different types of protein modification-dependent interactions in intact cells.

Indexed as

Proto-Oncogene ProteinsAnimalsAntigens, NeoplasmBinding SitesBiomarkers, TumorCell LineDimerizationDNA-Binding ProteinsHumansJanus Kinase 2Lectins, C-TypeLuciferasesMutationPancreatitis-Associated ProteinsPhosphorylationPromoter Regions, GeneticAntigens, NeoplasmBiomarkers, TumorDNA-Binding ProteinsJAK2 protein, humanJak2 protein, ratJanus Kinase 2Lectins, C-TypeLuciferasesPancreatitis-Associated ProteinsProtein-Tyrosine KinasesProto-Oncogene ProteinsReceptors, Cell SurfaceReceptors, ErythropoietinReceptors, Granulocyte-Macrophage Colony-Stimulating FactorReceptors, LeptinREG3A protein, humanSmad3 ProteinSMAD3 protein, humanSmad3 protein, ratSmad4 ProteinSMAD4 protein, humanSmad4 protein, ratSTAT3 protein, humanStat3 protein, ratSTAT3 Transcription FactorTrans-Activators

Identifiers

PMID12853652
PMCPMC167658
OpenAlexW2164146079

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.