Evidence map›Paper›PMID 12840045›Full record

ArticleGenome research2003

Identification of a large novel imprinted gene cluster on mouse proximal chromosome 6.

Ryuichi Ono, Hirosuke Shiura, Hiroyuki Aburatani, Takashi Kohda, Tomoko Kaneko-Ishino, Fumitoshi Ishino

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 138 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Roles of retrovirus-derivedFrontiers in cell and developmental biology · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Genomic Imprinting at the PorcineAnimals : an open access journal from MDPI · 2021
    Article
  12. HERV-DerivedInternational journal of molecular sciences · 2021
    Article
  13. Article
  14. Article
  15. Heterozygous/dispermic complete mole confers a significantly higher risk for post-molar gestational trophoblastic disease.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2020
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Epigenetic analysis of bovine parthenogenetic embryonic fibroblasts.The Journal of reproduction and development · 2017
    Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ryuichi OnoGene Research Center, Tokyo Institute of Technology, Yokohama 226-8501, Japan.
Hirosuke Shiura
Hiroyuki Aburatani
Takashi Kohda
Tomoko Kaneko-Ishino
Fumitoshi Ishino
Tokyo Institute of Technology · JPJapan Science and Technology Agency · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mice with maternal duplication of proximal chromosome 6 die in utero at an early embryonic stage. Recently, two imprinted genes, paternally expressed Sgce and maternally expressed Asb4, were identified in this region. This report analyzes the imprinting status of genes within a 1-Mb region containing these two genes. Peg10, which is next to Sgce, shows complete paternal expression, like Sgce. Conversely, Neurabin, Pon2, and Pon3 show preferential maternal expression at embryonic stages, although they all show biallelic expression in neonatal tissues. These results demonstrate that there is a large novel imprinted gene cluster in this region. 5'-RACE (Rapid Amplification of cDNA Ends) analysis of Peg10 revealed the existence of a novel first exon separate from the second exon, which encoded two putative ORFs similar to the viral Gag and Pol proteins. A differentially methylated region established in sperm and eggs is located just within the region containing the two first exons of Peg10 and Sgce, and may play an important role in regulating the two paternally expressed genes: Peg10 and Sgce.

Indexed as

Chromosome MappingAnimalsCollagenCollagen Type ICpG IslandsDNA MethylationEmbryo, MammalianFemaleGene Expression RegulationGenetic MarkersGenomeGenomic ImprintingMaleMiceMice, Inbred C57BLMolecular Sequence DataCollagenCollagen Type IGenetic Markers

Identifiers

PMID12840045
PMCPMC403743
OpenAlexW2027911313

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.