Evidence map›Paper›PMID 12832469›Full record

ArticleMolecular and cellular biology2003

Sum1 and Ndt80 proteins compete for binding to middle sporulation element sequences that control meiotic gene expression.

Michael Pierce, Kirsten R Benjamin, Sherwin P Montano, Millie M Georgiadis, Edward Winter, Andrew K Vershon

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
  2. Article
  3. Meiotic Cytokinesis inJournal of fungi (Basel, Switzerland) · 2024
    Review
  4. Article
  5. Article
  6. Conservation and Expansion of Transcriptional Factor Repertoire in thebioRxiv : the preprint server for biology · 2023
    Article
  7. Article
  8. Phospho-Regulation of Meiotic Prophase.Frontiers in cell and developmental biology · 2021
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. RegulatorDB: a resource for the analysis of yeast transcriptional regulation.Database : the journal of biological databases and curation · 2017
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Michael PierceWaksman Institute and Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, New Jersey 08854, USA.
Kirsten R Benjamin
Sherwin P Montano
Millie M Georgiadis
Edward Winter
Andrew K Vershon
Rutgers, The State University of New Jersey · USIndiana University – Purdue University Indianapolis · USIndiana University School of MedicineThomas Jefferson University · USUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A key transition in meiosis is the exit from prophase and entry into the nuclear divisions, which in the yeast Saccharomyces cerevisiae depends upon induction of the middle sporulation genes. Ndt80 is the primary transcriptional activator of the middle sporulation genes and binds to a DNA sequence element termed the middle sporulation element (MSE). Sum1 is a transcriptional repressor that binds to MSEs and represses middle sporulation genes during mitosis and early sporulation. We demonstrate that Sum1 and Ndt80 have overlapping yet distinct sequence requirements for binding to and acting at variant MSEs. Whole-genome expression analysis identified a subset of middle sporulation genes that was derepressed in a sum1 mutant. A comparison of the MSEs in the Sum1-repressible promoters and MSEs from other middle sporulation genes revealed that there are distinct classes of MSEs. We show that Sum1 and Ndt80 compete for binding to MSEs and that small changes in the sequence of an MSE can yield large differences in which protein is bound. Our results provide a mechanism for differentially regulating the expression of middle sporulation genes through the competition between the Sum1 repressor and the Ndt80 activator.

Indexed as

Gene Expression Regulation, FungalRegulatory Sequences, Nucleic AcidAmino Acid SequenceBinding, CompetitiveDNA-Binding ProteinsMeiosisMitogen-Activated Protein KinasesMolecular Sequence DataMutationNuclear ProteinsRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsDNA-Binding ProteinsMitogen-Activated Protein KinasesNDT80 protein, S cerevisiaeNuclear ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsSmk1 protein, S cerevisiaeSUM1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID12832469
PMCPMC162219
OpenAlexW2113391242

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.