Evidence map›Paper›PMID 12829813›Full record

ArticleJournal of virology2003

Infectivity and replication capacity of drug-resistant human immunodeficiency virus type 1 variants isolated during primary infection.

Viviana Simon, Neal Padte, Deya Murray, Jeroen Vanderhoeven, Terri Wrin, Neil Parkin, Michele Di Mascio, Martin Markowitz

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  7. Minority variants of drug-resistant HIV.The Journal of infectious diseases · 2010
    Review
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  19. The causes and consequences of HIV evolution.Nature reviews. Genetics · 2004
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Viviana SimonAaron Diamond AIDS Research Center, The Rockefeller University, 455 First Avenue, 7th Floor, New York, NY 10016, USA. vsimon@adarc.org
Neal Padte
Deya Murray
Jeroen Vanderhoeven
Terri Wrin
Neil Parkin
Michele Di Mascio
Martin Markowitz
Aaron Diamond AIDS Research Center · USRockefeller University · USVIR Biotechnology (United States) · USLos Alamos National Laboratory · US

Funding

WOUND HEALING IN INDIVIDUALS OF DIFFERENT AGE AND GENETIC BACKGROUNDM01RR000102 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 1985 to 2006
$32.8M
TRANSMISSION AND VIRAL DYMANICS OF DRUG RESISTANT HIV-1R01AI047033 · NIAID · AARON DIAMOND AIDS RESEARCH CENTER · PI MARKOWITZ, MARTIN H · 2000 to 2011
$6.0M
NCRR NIH HHS M01 RR000102NCRR NIH HHS M01 RR 00102NIAID NIH HHS AI 47033NIAID NIH HHS R01 AI047033
6 · The paper itself

Abstract

It is believed that replication capacity is an important determinant of human immunodeficiency virus type 1 (HIV-1) pathogenicity and transmissibility. To explore this, we conducted a comprehensive analysis of the replication properties of nine drug-resistant and nine drug-susceptible viral isolates derived from patients with primary HIV-1 infection. Viral isolates were tested for single-cycle infectivity in the GHOST cell line. The infectivity of isolates carrying resistance-associated mutations was significantly higher than that of drug-susceptible isolates. Additionally, the growth kinetics of these isolates were determined in CD4+ T lymphocytes. Drug-resistant isolates replicated as well as drug-susceptible viruses. Insertion of the resistance-conferring regions into an NL4-3-based molecular background resulted in chimeras that displayed a modest but significant reduction in replication capacity compared to the drug-susceptible chimeric viruses. Of note, two multidrug-resistant isolates and one protease inhibitor-resistant isolate displayed higher rates of infectivity and growth kinetics than the other drug-resistant or drug-susceptible isolates. These distinct replicative features, however, were not seen in the corresponding chimeras, indicating that changes within the C-terminal region of Gag as well as within the protease and reverse transcriptase genes contribute to but are not sufficient for the level of compensatory adaptation observed. These findings suggest that some drug-resistant viruses isolated during primary infection possess unique adaptive changes that allow for both high viral replication capacity and resistance to one or more classes of antiretroviral drugs. Further studies are needed to elucidate the precise regions that are essential for these characteristics.

Indexed as

Virus ReplicationAmino Acid SubstitutionAnti-HIV AgentsDrug Resistance, Multiple, ViralDrug Resistance, ViralFemaleGene Products, gagGenes, gagHIV-1HIV InfectionsHIV ProteaseHIV Protease InhibitorsHIV Reverse TranscriptaseHumansMaleMolecular Sequence DataAnti-HIV AgentsGene Products, gagHIV ProteaseHIV Protease InhibitorsHIV Reverse TranscriptaseReverse Transcriptase Inhibitors

Identifiers

PMID12829813
PMCPMC161921
OpenAlexW2150163022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.