Evidence map›Paper›PMID 12821947›Full record

ArticleOncogene2003

Age-related methylation of tumor suppressor and tumor-related genes: an analysis of autopsy samples.

Takayoshi Waki, Gen Tamura, Makoto Sato, Teiichi Motoyama

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed, 2 pooled it
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 2 syntheses or guidelines pooled it, 186 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Review
  6. Review
  7. The Nutriepigenome.Genes · 2023
    Review
  8. Review
  9. Article
  10. The epigenetic aging, obesity, and lifestyle.Frontiers in cell and developmental biology · 2022
    Review
  11. Pharmacological Approaches to Decelerate Aging: A Promising Path.Oxidative medicine and cellular longevity · 2022
    Review
  12. Review
  13. Article
  14. Wandering along the epigenetic timeline.Clinical epigenetics · 2020
    Review
  15. Haematologica · 2020
    Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Epigenetics: Linking Nutrition to Molecular Mechanisms in Aging.Preventive nutrition and food science · 2017
    Review

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Takayoshi WakiDepartment of Pathology, Yamagata University School of Medicine, 2-2-2 Iida-nishi, Yamagata, 990-9585, Japan.
Gen Tamura
Makoto Sato
Teiichi Motoyama
Yamagata University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age-related methylation may have the potential to behave as a mutator process. To clarify the physiological consequence of age-related methylation of tumor suppressor and tumor-related genes, we studied promoter methylation status in non-neoplastic cells of various organs obtained at autopsy by methylation-specific PCR. Promoter methylation status of APC, DAP-kinase, E-cadherin, GSTP1, hMLH1, p16, RASSF1A and RUNX3 genes, which are frequently silenced in certain human malignancies, was studied in non-neoplastic cells of the esophagus, stomach, small and large intestines, liver, pancreas, kidney and lung obtained from 38 Japanese autopsies. The tumor suppressor and tumor-related genes, except APC and RASSF1A, were generally unmethylated in samples obtained from people who were less than 32 years old (n=11). Methylated promoters were present at variable frequencies in a tissue-specific manner in samples obtained from people who were greater than 42 years old (n=27), although GSTP1 and hMLH1 methylation was absent or infrequent and lacked tissue specificity. In the majority of organs, the incidence of age-related methylation paralleled the reported methylation incidence in malignant counterparts. Thus, age-related methylation of a different set of genes is thought to constitute a field defect in different organs.

Indexed as

DNA MethylationPromoter Regions, GeneticAdaptor Proteins, Signal TransducingAdolescentAdultAgedAged, 80 and overAge FactorsAutopsyCarrier ProteinsCells, CulturedChildFemaleGlutathione S-Transferase piGlutathione TransferaseHumansAdaptor Proteins, Signal TransducingCarrier ProteinsGlutathione S-Transferase piGlutathione TransferaseGSTP1 protein, humanIsoenzymesMLH1 protein, humanMutL Protein Homolog 1Neoplasm ProteinsNuclear ProteinsSulfites

Identifiers

PMID12821947
OpenAlexW2021527895

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.