Evidence map›Paper›PMID 1281515›Full record

ArticleMolecular & general genetics : MGG1992

Sequence and transcript analysis of the Nco2.5 Ogura-specific fragment correlated with cytoplasmic male sterility in Brassica cybrids.

S Bonhomme, F Budar, D Lancelin, I Small, M C Defrance, G Pelletier

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Molecular & general genetics : MGG, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 1 synthesis or guideline pooled it, 199 citations in OpenAlex.

  1. Pooled it
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  6. Analysis ofInternational journal of molecular sciences · 2024
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  16. The radish Ogura fertility restorer impedes translation elongation along its cognate CMS-causing mRNA.Proceedings of the National Academy of Sciences of the United States of America · 2021
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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

S BonhommeLaboratorie de Biologie Cellulaire, INRA Centre de Versailles, France.
F Budar
D Lancelin
I Small
M C Defrance
G Pelletier
Laboratoire de Biologie et Modélisation de la Cellule · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sequence analysis of the Ogura-specific mitochondrial DNA (mtDNA) fragment isolated previously from Brassica cybrids carrying Ogura cytoplasmic male sterility (cms) revealed a tRNA(fMet) sequence, a putative 138 amino acid open reading frame (orf138), and a 158 amino acid ORF (orf158) previously observed in mitochondrial genomes from several other plant species. Transcription mapping showed that both ORFs are present on a 1.4 kb cms-specific transcript. The orf158 sequence is also transcribed in fertile plants on a different mRNA, and thus is unlikely to be related to cms. On the other hand, fertile revertant plants lack transcripts of the orf138 sequence, whose possible role in the mechanism of Ogura cms is discussed.

Indexed as

RNA, Transfer, MetTranscription, GeneticAmino Acid SequenceBase SequenceBrassicaCloning, MolecularDeoxyribonucleases, Type II Site-SpecificDNA, MitochondrialFertilityGenotypeMolecular Sequence DataOpen Reading FramesRestriction MappingRNARNA, MessengerRNA, Transfer, Amino AcylDeoxyribonucleases, Type II Site-SpecificDNA, Mitochondrialendodeoxyribonuclease NcoIRNARNA, MessengerRNA, Transfer, Amino AcylRNA, Transfer, MettRNA, formylmethionine-

Identifiers

PMID1281515
OpenAlexW2085495697

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.