Evidence map›Paper›PMID 12808091›Full record

ArticleMolecular and cellular biology2003

Selectable system for monitoring the instability of CTG/CAG triplet repeats in mammalian cells.

Vera Gorbunova, Andrei Seluanov, Vincent Dion, Zoltan Sandor, James L Meservy, John H Wilson

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Break-induced replication sparks CGG-repeat instability.Nature structural & molecular biology · 2018
    Article
  10. Mechanisms of genetic instability caused by (CGG)Nature structural & molecular biology · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Zinc-finger directed double-strand breaks within CAG repeat tracts promote repeat instability in human cells.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  20. Transcription destabilizes triplet repeats.Molecular carcinogenesis · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Vera GorbunovaVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Andrei Seluanov
Vincent Dion
Zoltan Sandor
James L Meservy
John H Wilson
Baylor College of Medicine · US

Funding

TARGETED RECOMBINATION IN MAMMALIAN CELLSR01GM038219 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI WILSON, JOHN H · 1987 to 2013
$4.3M
NIGMS NIH HHS GM38219NIGMS NIH HHS R01 GM038219
6 · The paper itself

Abstract

Despite substantial progress in understanding the mechanism by which expanded CTG/CAG trinucleotide repeats cause neurodegenerative diseases, little is known about the basis for repeat instability itself. By taking advantage of a novel phenomenon, we have developed a selectable assay to detect contractions of CTG/CAG triplets. When inserted into an intron in the APRT gene or the HPRT minigene, long tracts of CTG/CAG repeats (more than about 33 repeat units) are efficiently incorporated into mRNA as a new exon, thereby rendering the encoded protein nonfunctional, whereas short repeat tracts do not affect the phenotype. Therefore, contractions of long repeats can be monitored in large cell populations, by selecting for HPRT(+) or APRT(+) clones. Using this selectable system, we determined the frequency of spontaneous contractions and showed that treatments with DNA-damaging agents stimulate repeat contractions. The selectable system that we have developed provides a versatile tool for the analysis of CTG/CAG repeat instability in mammalian cells. We also discuss how the effect of long CTG/CAG repeat tracts on splicing may contribute to the progression of polyglutamine diseases.

Indexed as

Genetic TechniquesTrinucleotide RepeatsAdenine PhosphoribosyltransferaseAnimalsBase SequenceBlotting, NorthernCell LineCHO CellsCricetinaeDNA DamageExonsGamma RaysGenes, ReporterHypoxanthine PhosphoribosyltransferaseIntronsModels, GeneticAdenine PhosphoribosyltransferaseHypoxanthine PhosphoribosyltransferasePeptidespolyglutamine

Identifiers

PMID12808091
PMCPMC164839
OpenAlexW2157458103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.