ArticlePlant physiology2003
Genomic comparison of P-type ATPase ion pumps in Arabidopsis and rice.
Article in Plant physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 144 papers.
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Who cites it
144 citing papers in PubMed.
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- Identification of the ACA/ECA gene family and preliminary verification of their functional in calcium transport in lettuce.Scientific reports · 2025Article
- Genome-wide survey of the HMA gene family in wheat (Triticum aestivum L.) and its potential role in cadmium stress.BMC genomics · 2025Article
- Evolutionarily conserved BON1 regulates the basal cytosolic CaProceedings of the National Academy of Sciences of the United States of America · 2025Article
- Genome-wide identification of the P4ATPase gene family and its response to biotic and abiotic stress in soybean (Glycine max L.).BMC genomics · 2025Article
- Identification and expression analysis of P-type ATPase IIIA subfamily in Puccinia Striiformis f. sp. tritici.BMC genomics · 2025Article
- Identification of candidate genes for drought tolerance in soybean through QTL mapping and gene expression analysis.Frontiers in genetics · 2025Article
- Recent advances in understanding the mechanisms of plant cadmium accumulation as affected by grafting in vegetable production.Frontiers in plant science · 2025Review
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2024Article
- Understanding the role of P-type ATPases in regulating pollen fertility and development in pigeonpea.Molecular genetics and genomics : MGG · 2024Article
- OsACA9, an Autoinhibited CaInternational journal of molecular sciences · 2024Article
- A two-sequence motif-based method for the inventory of gene families in fragmented and poorly annotated genome sequences.BMC genomics · 2024Article
- Genome-Wide Identification and Expression Profiling of Heavy Metal ATPase (HMA) Genes in Peanut: Potential Roles in Heavy Metal Transport.International journal of molecular sciences · 2024Article
- Identification of the potato (Frontiers in plant science · 2024Article
- Plasma membrane-localized HPlant cell reports · 2023Article
- Article
84 more citing papers are in PubMed but not listed here.
Corrections and comments
- Erratum issued
Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Members of the P-type ATPase ion pump superfamily are found in all three branches of life. Forty-six P-type ATPase genes were identified in Arabidopsis, the largest number yet identified in any organism. The recent completion of two draft sequences of the rice (Oryza sativa) genome allows for comparison of the full complement of P-type ATPases in two different plant species. Here, we identify a similar number (43) in rice, despite the rice genome being more than three times the size of Arabidopsis. The similarly large families suggest that both dicots and monocots have evolved with a large preexisting repertoire of P-type ATPases. Both Arabidopsis and rice have representative members in all five major subfamilies of P-type ATPases: heavy-metal ATPases (P1B), Ca2+-ATPases (endoplasmic reticulum-type Ca2+-ATPase and autoinhibited Ca2+-ATPase, P2A and P2B), H+-ATPases (autoinhibited H+-ATPase, P3A), putative aminophospholipid ATPases (ALA, P4), and a branch with unknown specificity (P5). The close pairing of similar isoforms in rice and Arabidopsis suggests potential orthologous relationships for all 43 rice P-type ATPases. A phylogenetic comparison of protein sequences and intron positions indicates that the common angiosperm ancestor had at least 23 P-type ATPases. Although little is known about unique and common features of related pumps, clear differences between some members of the calcium pumps indicate that evolutionarily conserved clusters may distinguish pumps with either different subcellular locations or biochemical functions.
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