Evidence map›Paper›PMID 12805435›Full record

ArticleJournal of virology2003

Viral escape from dominant simian immunodeficiency virus epitope-specific cytotoxic T lymphocytes in DNA-vaccinated rhesus monkeys.

Dan H Barouch, Jennifer Kunstman, Jennifer Glowczwskie, Kevin J Kunstman, Michael A Egan, Fred W Peyerl, Sampa Santra, Marcelo J Kuroda, Jörn E Schmitz, Kristin Beaudry and 5 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 163 citations in OpenAlex.

  1. HLA-B*14:02-Restricted Env-Specific CD8Journal of virology · 2017
    Trial
  2. Trial
  3. Article
  4. Role of HIV-specific CD8The Journal of experimental medicine · 2017
    Article
  5. Article
  6. Article
  7. Article
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  18. Article
  19. Review
  20. Novel adenovirus vector-based vaccines for HIV-1.Current opinion in HIV and AIDS · 2010
    Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Dan H BarouchDivision of Viral Pathogenesis, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts 02215, USA. dbarouch@bidmc.harvard.edu
Jennifer Kunstman
Jennifer Glowczwskie
Kevin J Kunstman
Michael A Egan
Fred W Peyerl
Sampa Santra
Marcelo J Kuroda
Jörn E Schmitz
Kristin Beaudry
Georgia R Krivulka
Michelle A Lifton
Darci A Gorgone
Steven M Wolinsky
Norman L Letvin
Beth Israel Deaconess Medical Center · USHarvard University · USNorthwestern University · US

Funding

DFCI-BIDMC-CH CENTER FOR AIDS RESEARCHP30AI028691 · NIAID · DANA-FARBER CANCER INSTITUTE · PI SODROSKI, JOSEPH G · 1989 to 2003
$6.2M
GREAT LAKES REGIONAL CENTER FOR AIDS RESEARCHP30CA079458 · NCI · NORTHWESTERN UNIVERSITY · PI NEATON, JAMES DENNIS · 1998 to 2002
$3.7M
IMMUNOREGULATION IN AIDSR01AI020729 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LETVIN, NORMAN L · 1985 to 2008
$3.1M
IMMUNOREGULATION IN AIDSR37AI020729 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LETVIN, NORMAN L · 1993 to 2002
$1.6M
IMMUNE REGULATIONS IN SIV INFECTIONSR01CA050139 · NCI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LETVIN, NORMAN L · 1989 to 2002
$1.2M
Cytokine-Augmented DNA Vaccine-Elicited Immunity to HIVK08AI051223 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI BAROUCH, DAN H. · 2002 to 2005
$448k
PRIMATE IMMUNOLOGY LABORATORY FOR AIDS VACCINE R&DN01AI085343 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI LETVIN, NORMAN L · 1998 to 2000
$412k
NCI NIH HHS CA-50139NCI NIH HHS P30 CA-79458NCI NIH HHS R01 CA050139NIAID NIH HHS AI-20729NIAID NIH HHS AI-51223NIAID NIH HHS AI-85343NIAID NIH HHS K08 AI051223NIAID NIH HHS P30 AI028691NIAID NIH HHS P30 AI-28691NIAID NIH HHS R01 AI020729NIAID NIH HHS R37 AI020729
6 · The paper itself

Abstract

Virus-specific cytotoxic T lymphocytes (CTL) are critical for control of human immunodeficiency virus type 1 replication. However, viral escape from CTL recognition can undermine this immune control. Here we demonstrate the high frequency and pattern of viral escape from dominant epitope-specific CTL in SIV gag DNA-vaccinated rhesus monkeys following a heterologous simian immunodeficiency virus (SIV) challenge. DNA-vaccinated monkeys exhibited initial effective control of the SIV challenge, but this early control was lost by serial breakthroughs of viral replication over a 3-year follow-up period. Increases in plasma viral RNA correlated temporally with declines of dominant SIV epitope-specific CD8(+) T-lymphocyte responses and the emergence of viral mutations that escaped recognition by dominant epitope-specific CTL. Viral escape from CTL occurred in a total of seven of nine vaccinated and control monkeys, including three animals that initially controlled viral replication to undetectable levels of plasma viral RNA. These data suggest that CTL exert selective pressure on viral replication and that viral escape from CTL may be a limitation of CTL-based AIDS vaccine strategies.

Indexed as

Amino Acid SequenceAnimalsBase SequenceDNA PrimersEvolution, MolecularImmunodominant EpitopesMacaca mulattaSimian Immunodeficiency VirusT-Lymphocytes, CytotoxicVaccines, DNAViral VaccinesDNA PrimersImmunodominant EpitopesVaccines, DNAViral Vaccines

Identifiers

PMID12805435
PMCPMC164797
OpenAlexW2144145615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.