Evidence map›Paper›PMID 12805231›Full record

ArticleThe EMBO journal2003

The nuclear actin-related proteins Arp7 and Arp9: a dimeric module that cooperates with architectural proteins for chromatin remodeling.

Heather Szerlong, Anjanabha Saha, Bradley R Cairns

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 112 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Envisioning a role for nuclear actin in prophase I spermatocytes.Frontiers in cell and developmental biology · 2023
    Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Role of Nhp6 and Hmo1 in SWI/SNF occupancy and nucleosome landscape at gene regulatory regions.Biochimica et biophysica acta. Gene regulatory mechanisms · 2017
    Article
  15. Article
  16. Crystal structure of a nuclear actin ternary complex.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  17. Article
  18. The Many Roles of BAF (mSWI/SNF) and PBAF Complexes in Cancer.Cold Spring Harbor perspectives in medicine · 2016
    Review
  19. Chromatin remodelers: We are the drivers!!Nucleus (Austin, Tex.) · 2016
    Review
  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Heather SzerlongHoward Hughes Medical Institute, Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Anjanabha Saha
Bradley R Cairns
Huntsman Cancer Institute · US

Funding

ANALYSIS OF THE CHROMATIN-REMODELING COMPLEX RSCR01GM060415 · NIGMS · UNIVERSITY OF UTAH · PI CAIRNS, BRADLEY R. · 1999 to 2011
$3.1M
NCI NIH HHS CA24014NIGMS NIH HHS GM60415NIGMS NIH HHS R01 GM060415
6 · The paper itself

Abstract

Nuclear actin-related proteins (ARPs) are essential components of chromatin remodeling and modifying complexes, but their functions and relationship to actin remain elusive. The yeast SWI/SNF and RSC complexes contain Arp7 and Arp9, and are shown to form a stable heterodimer with the properties of a functional module. Arp7 and Arp9 rely on their actin-related regions for heterodimerization, and their unique C-termini cooperate for assembly into RSC. We suggest that regulated ARP-ARP (and possibly ARP-beta-actin) heterodimerization might be a conserved feature of chromatin complexes. A RSC complex lacking Arp7/9 was isolated that displays robust nucleosome remodeling activity, suggesting a separate essential role for ARPs in the regulation of chromatin structure. A screen for suppressors of arp mutations yielded the DNA bending architectural transcription factor Nhp6, which interacts with RSC complex physically and functionally and shows facilitated binding to nucleosomes by RSC. We propose that Arp7/9 dimers function with DNA bending proteins to facilitate proper chromatin architecture and complex- complex interactions.

Indexed as

Schizosaccharomyces pombe ProteinsActinsAllelesAmino Acid SequenceChromatinChromosomal Proteins, Non-HistoneDimerizationDNA-Binding ProteinsHMGN ProteinsMacromolecular SubstancesMolecular Sequence DataMutationNuclear ProteinsNucleosomesRepressor ProteinsSaccharomyces cerevisiaeActinsARP7 protein, S cerevisiaeARP9 protein, S cerevisiaeChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsHMGN ProteinsMacromolecular SubstancesMra1 protein, S pombeNHP6A protein, S cerevisiaeNHP6B protein, S cerevisiaeNuclear ProteinsNucleosomesRepressor ProteinsSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe ProteinsTranscription Factors

Identifiers

PMID12805231
PMCPMC162148
OpenAlexW2133858902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.