Evidence map›Paper›PMID 12800254›Full record

ArticleWorld journal of gastroenterology2003

Identification of RanBMP interacting with Shigella flexneri IpaC invasin by two-hybrid system of yeast.

Xiao Yao, Heng-Liang Wang, Zhao-Xing Shi, Xiao-Yu Yan, Er-Ling Feng, Bo-Lun Yang, Liu-Yu Huang

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xiao YaoCollege of Environmental and Chemical Engineering, Xi'an Jiaotong University, Xi'an 710049, Shaanxi Province, China.
Heng-Liang Wang
Zhao-Xing Shi
Xiao-Yu Yan
Er-Ling Feng
Bo-Lun Yang
Liu-Yu Huang
Xi'an Jiaotong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimBacillary dysentery caused by Shigella flexneri is still a threat to human health. Of four invasion plasmid antigen proteins (IpaA,B,C and D), IpaC plays an important role in the pathogenicity of this pathogen. The purpose of this study was to investigate the proteins interacting with IpaC in the host cell during the pathogenic process of this disease.

methodsBy applying two-hybrid system, the bait plasmid containing ipaC gene was constructed and designated pGBKT-ipaC. The bait plasmid was transformed AH109, and proved to express IpaC and then HeLa cDNA library plasmids were introduced into the above transformed AH109. The transformation mixture was plated on medium lacking Trp, Leu, and His in the initial screen, then restreaked on medium lacking Trp, Leu, His and Ade. Colonies growing on the selection medium were further assayed for beta-galactosidase activity. BLAST was carried out in the database after sequencing the inserted cDNA of the positive library plasmid.

resultsAmong the 2X10(6) transformants, 64 positive clones were obtained as determined by activation of His, Ade and LacZ reporter genes. Sequence analysis revealed that cDNA inserts of two colonies were highly homologous to a known human protein, RanBPM.

conclusionThese results provide evidence that IpaC may be involved in the invasion process of S. flexneri by interacting with RanBPM, and RanBPM is most likely to be the downstream target of IpaC in the cascade events of S. flexneri infection.

Indexed as

Adaptor Proteins, Signal TransducingAdhesins, BacterialAntigens, BacterialCytoskeletal ProteinsHumansNuclear Proteinsran GTP-Binding ProteinShigella flexneriTwo-Hybrid System TechniquesYeastsAdaptor Proteins, Signal TransducingAdhesins, BacterialAntigens, BacterialCytoskeletal Proteinsinvasin, YersiniaIpaC protein, ShigellaNuclear ProteinsRan binding protein 9ran GTP-Binding Protein

Identifiers

PMID12800254
PMCPMC4611814
OpenAlexW2416176734

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.