Evidence map›Paper›PMID 12799489›Full record

ArticleJournal of biosciences2003

The transcriptional activator GAL4-VP16 regulates the intra-molecular interactions of the TATA-binding protein.

Anurag Kumar Mishra, Perumal Vanathi, Purnima Bhargava

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of biosciences, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Biology · 2021
    Review
  2. NovelInternational journal of molecular sciences · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Anurag Kumar MishraCentre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007,India.
Perumal Vanathi
Purnima Bhargava
Centre for Cellular and Molecular Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Binding characteristics of yeast TATA-binding protein (yTBP) over five oligomers having different TATA variants and lacking a UASGAL, showed that TATA-binding protein (TBP)-TATA complex gets stabilized in the presence of the acidic activator GAL4-VP16. Activator also greatly suppressed the non-specific TBP-DNA complex formation. The effects were more pronounced over weaker TATA boxes. Activator also reduced the TBP dimer levels both in vitro and in vivo, suggesting the dimer may be a direct target of transcriptional activators. The transcriptional activator facilitated the dimer to monomer transition and activated monomers further to help TBP bind even the weaker TATA boxes stably. The overall stimulatory effect of the GAL4-VP16 on the TBP-TATA complex formation resembles the known effects of removal of the N-terminus of TBP on its activity, suggesting that the activator directly targets the N-terminus of TBP and facilitates its binding to the TATA box.

Indexed as

Transcriptional ActivationCross-Linking ReagentsDimerizationDNADNA-Binding ProteinsDose-Response Relationship, DrugFungal ProteinsHerpes Simplex Virus Protein Vmw65Models, BiologicalProtein BindingProtein Structure, TertiarySaccharomyces cerevisiae ProteinsTATA-Box Binding ProteinTrans-ActivatorsTranscription FactorsCross-Linking ReagentsDNADNA-Binding ProteinsFungal ProteinsGAL4 protein, S cerevisiaeHerpes Simplex Virus Protein Vmw65Saccharomyces cerevisiae ProteinsTATA-Box Binding ProteinTrans-ActivatorsTranscription Factors

Identifiers

PMID12799489
OpenAlexW2001422964

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.