Evidence map›Paper›PMID 12799447›Full record

ArticleNucleic acids research2003

Alternatively spliced isoforms of the human constitutive androstane receptor.

Scott S Auerbach, Richard Ramsden, Matthew A Stoner, Christophe Verlinde, Christopher Hassett, Curtis J Omiecinski

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
7.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 118 citations in OpenAlex.

  1. Article
  2. Article
  3. Review ofFrontiers in endocrinology · 2022
    Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Nuclear receptors and nonalcoholic fatty liver disease.Biochimica et biophysica acta · 2016
    Review
  13. Small-molecule modulators of PXR and CAR.Biochimica et biophysica acta · 2016
    Review
  14. Article
  15. Article
  16. Small-molecule modulators of the constitutive androstane receptor.Expert opinion on drug metabolism & toxicology · 2015
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Scott S AuerbachDepartment of Pharmacology, University of Washington, Seattle, WA, USA.
Richard Ramsden
Matthew A Stoner
Christophe Verlinde
Christopher Hassett
Curtis J Omiecinski
University of Washington · US

Funding

XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI ALI SHOJAIE · 1995 to 2026
$42.5M
Environmetal Pathology/Toxicology Training ProgramT32ES007032 · NIEHS · UNIVERSITY OF WASHINGTON · PI FAUSTMAN, ELAINE M, ROSENFELD, MICHAEL E · 1985 to 2023
$10.7M
Targeting Dynamics of CAR and PXR in the Mouse and Human GenomesR01GM066411 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI OMIECINSKI, CURTIS J · 2002 to 2017
$4.5M
NIEHS NIH HHS ES07032NIEHS NIH HHS ES07033NIEHS NIH HHS P30 ES007033NIEHS NIH HHS T32 ES007032NIGMS NIH HHS GM66411NIGMS NIH HHS R01 GM066411
6 · The paper itself

Abstract

The nuclear receptor CAR (NR1I3) regulates transcription of genes encoding xenobiotic- and steroid-metabolizing enzymes. Regulatory processes that are mediated by CAR are modulated by a structurally diverse array of chemicals including common pharmaceutical and environmental agents. Here we describe four in-frame splice variants of the human CAR receptor gene. The variant mRNA splice transcripts were expressed in all human livers evaluated. Molecular modeling of the splice variant proteins predicts that the structural effects are localized within the receptor's ligand-binding domain. Assays to assess function indicate that the variant proteins, when compared with the reference protein isoform, exhibit compromised activities with respect to DNA binding, transcriptional activation and coactivator recruitment.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsBase SequenceBlotting, WesternCloning, MolecularConstitutive Androstane ReceptorCOS CellsDNAHistone AcetyltransferasesHumansLigandsLiverModels, MolecularMolecular Sequence DataNuclear Receptor Coactivator 1Constitutive Androstane ReceptorDNAHistone AcetyltransferasesLigandsNCOA1 protein, humanNR1I3 protein, humanNuclear Receptor Coactivator 1Protein IsoformsReceptors, Cytoplasmic and NuclearRecombinant ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID12799447
PMCPMC162252
OpenAlexW2113793088

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.