Evidence map›Paper›PMID 12796307›Full record

ArticleEukaryotic cell2003

Genetic interactions of the E3 ubiquitin ligase component FbxA with cyclic AMP metabolism and a histidine kinase signaling pathway during Dictyostelium discoideum development.

Turgay Tekinay, Herbert L Ennis, Mary Y Wu, Margaret Nelson, Richard H Kessin, David I Ratner

Abstract read
In one paragraph

Article in Eukaryotic cell, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Formation and Stimuli-Directed Migration ofJournal of medical and biological engineering · 2013
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Turgay TekinayDepartment of Anatomy and Cell Biology, Columbia University, New York, New York 10032, USA.
Herbert L Ennis
Mary Y Wu
Margaret Nelson
Richard H Kessin
David I Ratner

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Parisa Tehranifar · 1985 to 2026
$115.3M
BIOCHEMISTRY AND GENETICS: HISTONE ACETYLASE FUNCTIONR01GM031336 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GRUNSTEIN, MICHAEL · 1985 to 1985
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CONFOCAL IMAGING FACILITYS10RR010506 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PON, LIZA A · 1996 to 1996
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BIORAD 2-PHOTON LASER SCANNING MICROSCOPY SYSTEMS10RR013701 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KRIEGSTEIN, ARNOLD · 1999 to 1999
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NCI NIH HHS P30 CA013696NCI NIH HHS P30 CA13696NCRR NIH HHS S10 RR10506NCRR NIH HHS S10 RR13701NIGMS NIH HHS GM31336-17
6 · The paper itself

Abstract

Dictyostelium discoideum amoebae with an altered fbxA gene, which is thought to encode a component of an SCF E3 ubiquitin ligase, have defective regulation of cell type proportionality. In chimeras with wild-type cells, the mutant amoebae form mainly spores, leaving the construction of stalks to wild-type cells. To examine the role of fbxA and regulated proteolysis, we have recovered the promoter of fbxA and shown that it is expressed in a pattern resembling that of a prestalk-specific gene until late in development, when it is also expressed in developing spore cells. Because fbxA cells are developmentally deficient in pure culture, we were able to select suppressor mutations that promote sporulation of the original mutant. One suppressor mutation resides within the gene regA, which encodes a cyclic AMP (cAMP) phosphodiesterase linked to an activating response regulator domain. In another suppressor, there has been a disruption of dhkA, a gene encoding a two-component histidine kinase known to influence Dictyostelium development. RegA appears precociously and in greater amounts in the fbxA mutant than in the wild type, but in an fbxA/dhkA double mutant, RegA is restored to wild-type levels. Because the basis of regA suppression might involve alterations in cAMP levels during development, the concentrations of cAMP in all strains were determined. The levels of cAMP are relatively constant during multicellular development in all strains except the dhkA mutant, in which it is reduced at least sixfold. The level of cAMP in the double mutant dhkA/fbxA is relatively normal. The levels of cAMP in the various mutants do not correlate with spore formation, as would be expected on the basis of our present understanding of the signaling pathway leading to the induction of spores. Altered amounts of RegA and cAMP early in the development of the mutants suggest that both fbxA and dhkA genes act earlier than previously thought.

Indexed as

AnimalsBase SequenceCyclic AMPDictyosteliumF-Box ProteinsGene Expression Regulation, DevelopmentalGenes, ReporterGenes, SuppressorGreen Fluorescent ProteinsHistidine KinaseLuminescent ProteinsMutagenesis, InsertionalPromoter Regions, GeneticProtein KinasesProtozoan ProteinsSignal TransductionCyclic AMPF-Box ProteinsFbxA protein, DictyosteliumGreen Fluorescent ProteinsHistidine KinaseLuminescent ProteinsProtein KinasesProtozoan ProteinsUbiquitin-Protein Ligases

Identifiers

PMID12796307
PMCPMC161463

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.