Evidence map›Paper›PMID 12791879›Full record

ArticleJournal of clinical microbiology2003

Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon.

Sara Ngo Niobe-Eyangoh, Christopher Kuaban, Philippe Sorlin, Patrick Cunin, Jocelyn Thonnon, Christophe Sola, Nalin Rastogi, Veronique Vincent, M Cristina Gutierrez

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Article
  4. Spoligotyping-based molecular typing ofFrontiers in medicine · 2025
    Article
  5. Article
  6. Review
  7. Non-Mycobacteria Tuberculosis in Africa: A Literature Review.Ethiopian journal of health sciences · 2023
    Review
  8. Article
  9. Biodiversity ofMicroorganisms · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Diversity ofTuberculosis research and treatment · 2021
    Article
  15. A pilot study on the genetic diversity ofJournal of clinical tuberculosis and other mycobacterial diseases · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Molecular Analysis ofJournal of epidemiology and global health · 2019
    Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sara Ngo Niobe-EyangohLaboratoire des Mycobactéries, Centre Pasteur, Yaoundé, Cameroon.
Christopher Kuaban
Philippe Sorlin
Patrick Cunin
Jocelyn Thonnon
Christophe Sola
Nalin Rastogi
Veronique Vincent
M Cristina Gutierrez

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We analyzed DNA polymorphisms in 455 Mycobacterium tuberculosis complex isolates from 455 patients to evaluate the biodiversity of tubercle bacilli in Ouest province, Cameroon. The phenotypic and genotypic identification methods gave concordant results for 99.5% of M. tuberculosis isolates (413 strains) and for 90% of Mycobacterium africanum isolates (41 strains). Mycobacterium bovis was isolated from only one patient. Analysis of regions of difference (RD4, RD9, and RD10) proved to be an accurate and rapid method of distinguishing between unusual members of the M. tuberculosis complex. Whereas M. africanum strains were the etiologic agent of tuberculosis in 56% of cases 3 decades ago, our results showed that these strains now account for just 9% of cases of tuberculosis. We identified a group of closely genetically related M. tuberculosis strains that are currently responsible for >40% of smear-positive pulmonary tuberculosis cases in this region of Cameroon. These strains shared a spoligotype lacking spacers 23, 24, and 25 and had highly related IS6110 ligation-mediated (LM) PCR patterns. They were designated the "Cameroon family." We did not find any significant association between tuberculosis-causing species or strain families and patient characteristics (sex, age, and human immunodeficiency virus status). A comparison of the spoligotypes of the Cameroon strains with an international spoligotype database (SpolDB3) containing 11,708 patterns from >90 countries, showed that the predominant spoligotype in Cameroon was limited to West African countries (Benin, Senegal, and Ivory Coast) and to the Caribbean area.

Indexed as

Polymorphism, GeneticCameroonDNA Transposable ElementsGenotypeHumansMolecular EpidemiologyMycobacteriumMycobacterium tuberculosisOligonucleotidesPhenotypePolymerase Chain ReactionTuberculosis, PulmonaryDNA Transposable ElementsOligonucleotides

Identifiers

PMID12791879
PMCPMC156567

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.