Evidence map›Paper›PMID 12791866›Full record

ArticleJournal of clinical microbiology2003

Quantitation of human immunodeficiency virus type 1 in breast milk.

M K Ghosh, L Kuhn, J West, K Semrau, D Decker, D M Thea, G M Aldrovandi

Registry-linked trialAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00310726 (Short Duration Exclusive Breastfeeding With Abrupt Weaning to Reduce the Risk of Mother-to-Child HIV Transmission), which is not on this map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00310726 nacompletednot on this map

Short Duration Exclusive Breastfeeding With Abrupt Weaning to Reduce the Risk of Mother-to-Child HIV Transmission

TypeinterventionalSponsorBoston Medical CenterRan2001 to 2006Enrolled1,435ConditionsHIV InfectionArmsabrupt weaning at 4 months, Continued exclusive breastfeeding
3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Effect of vitamin supplements on HIV shedding in breast milk.The American journal of clinical nutrition · 2010
    Trial
  4. Trial
  5. Trial
  6. Trial
  7. Trial
  8. Trial
  9. Best Practices for Human Milk Collection for COVID-19 Research.Breastfeeding medicine : the official journal of the Academy of Breastfeeding Medicine · 2021
    Review
  10. A Method for Targeted 16S Sequencing of Human Milk Samples.Journal of visualized experiments : JoVE · 2018
    Article
  11. Article
  12. Article
  13. Dynamics of breast milk HIV-1 RNA with unilateral mastitis or abscess.Journal of acquired immune deficiency syndromes (1999) · 2013
    Article
  14. Article
  15. Cumulative exposure to cell-free HIV in breast milk, rather than feeding pattern per se, identifies postnatally infected infants.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2011
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Impact of chloroquine on viral load in breast milk.Tropical medicine & international health : TM & IH · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

M K GhoshDepartment of Pediatrics. Microbiology, University of Alabama at Birmingham, Birmingham, Alabama 35249, USA.
L Kuhn
J West
K Semrau
D Decker
D M Thea
G M Aldrovandi
Boston University · USColumbia University · US

Funding

LC - IMPAACT Leadership GroupUM1AI106716 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Grace M Aldrovandi · 2014 to 2026
$47.2M
Short Exclusive Breastfeeding to Reduce Postnatal Transmission of HIVR01HD039611 · NICHD · BOSTON UNIVERSITY MEDICAL CAMPUS · PI THEA, DONALD M · 2000 to 2006
$8.0M
Pathogenesis of Mother to Child Transmission of HIVR01HD040777 · NICHD · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ALDROVANDI, GRACE M · 2002 to 2011
$4.4M
Immunologic Effects of Lactation on HIV infected womenR21HD049287 · NICHD · CHILDREN'S HOSPITAL OF LOS ANGELES · PI ALDROVANDI, GRACE M. · 2005 to 2006
$452k
NIAID NIH HHS UM1 AI106716NICHD NIH HHS HD396110NICHD NIH HHS HD40777NICHD NIH HHS R01 HD039611NICHD NIH HHS R01 HD040777NICHD NIH HHS R21 HD049287
6 · The paper itself

Abstract

The distribution and stability of human immunodeficiency virus type 1 (HIV-1) in breast milk (BM) components remain largely unknown. Inhibitory effects, if any, of BM on HIV RNA and DNA PCR amplification are poorly understood. We have addressed these issues by using virus-spiked BM samples from HIV-negative women. BM samples from HIV-negative women were spiked with HIV-1 virions or cells containing a single integrated copy of HIV DNA (8E5/LAV). After incubation under different experimental conditions, viral RNA was detected by the Roche Amplicor UltraSensitive assay in whole-milk, skim milk, and lipid fractions. We found excellent correlation between HIV-1 input copy and recovery in whole milk (r = 0.965, P < 0.0001), skim milk (r = 0.972, P < 0.0001), and the lipid fraction (r = 0.905, P < 0.001). PCR inhibition was observed in less than 10% of the spiked samples. Similar levels of inhibition were noted in BM samples collected from HIV-infected women. HIV proviral DNA was detected in BM samples using real-time PCR (linear correlation between the threshold cycle versus log DNA copy number, >0.982). The effects of incubation duration and temperature and repeated freeze-thaw cycles on HIV RNA recovery were analyzed. HIV RNA levels were remarkably stable in whole milk after three freeze-thaw cycles and for up to 30 h at room temperature. Our findings improve the understanding of the dynamics of HIV detection in BM and the conditions for BM sample collection, storage, and processing.

Indexed as

DNA, ViralFemaleFreezingHIV-1HIV InfectionsHumansMilk, HumanProvirusesRNA, ViralSpecimen HandlingDNA, ViralRNA, Viral

Identifiers

PMID12791866
PMCPMC156553
OpenAlexW2123937445

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.