Evidence map›Paper›PMID 12783625›Full record

ArticleBMC cardiovascular disorders2003

The rat STSL locus: characterization, chromosomal assignment, and genetic variations in sitosterolemic hypertensive rats.

Hongwei Yu, Bhaswati Pandit, Eric Klett, Mi-Hye Lee, Kangmo Lu, Khalil Helou, Ikuo Ikeda, Nami Egashira, Masao Sato, Richard Klein and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC cardiovascular disorders, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Sitosterolemia: diagnosis, investigation, and management.Current atherosclerosis reports · 2014
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Sterolins ABCG5 and ABCG8: regulators of whole body dietary sterols.Pflugers Archiv : European journal of physiology · 2007
    Review
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Hongwei YuDivision of Endocrinology, Diabetes and Medical Genetics, Medical University of South Carolina, STR 541, 114 Doughty Street, Charleston, SC 29403, USA. yuh@musc.edu
Bhaswati Pandit
Eric Klett
Mi-Hye Lee
Kangmo Lu
Khalil Helou
Ikuo Ikeda
Nami Egashira
Masao Sato
Richard Klein
Ashok Batta
Gerald Salen
Shailendra B Patel
Medical University of South Carolina · USKyushu University · JPVeterans Biomedical Research Institute · USCenter for Cancer Research · US

Funding

GENETIC AND BIOMEDICAL STUDIES OF SITOSTEROLEMIAR01HL060613 · NHLBI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI PATEL, SHAILENDRA BHANUBHAI · 2000 to 2003
$1.5M
NHLBI NIH HHS R01 HL060613NHLBI NIH HHS U01 HL6657
6 · The paper itself

Abstract

backgroundElevated plant sterol accumulation has been reported in the spontaneously hypertensive rat (SHR), the stroke-prone spontaneously hypertensive rat (SHRSP) and the Wistar-Kyoto (WKY) rat. Additionally, a blood pressure quantitative trait locus (QTL) has been mapped to rat chromosome 6 in a New Zealand genetically hypertensive rat strain (GH rat). ABCG5 and ABCG8 (encoding sterolin-1 and sterolin-2 respectively) have been shown to be responsible for causing sitosterolemia in humans. These genes are organized in a head-to-head configuration at the STSL locus on human chromosome 2p21.

methodsTo investigate whether mutations in Abcg5 or Abcg8 exist in SHR, SHRSP, WKY and GH rats, we initiated a systematic search for the genetic variation in coding and non-coding region of Abcg5 and Abcg8 genes in these strains. We isolated the rat cDNAs for these genes and characterized the genomic structure and tissue expression patterns, using standard molecular biology techniques and FISH for chromosomal assignments.

resultsBoth rat Abcg5 and Abcg8 genes map to chromosome band 6q12. These genes span ~40 kb and contain 13 exons and 12 introns each, in a pattern identical to that of the STSL loci in mouse and man. Both Abcg5 and Abcg8 were expressed only in liver and intestine. Analyses of DNA from SHR, SHRSP, GH, WKY, Wistar, Wistar King A (WKA) and Brown Norway (BN) rat strains revealed a homozygous G to T substitution at nucleotide 1754, resulting in the coding change Gly583Cys in sterolin-1 only in rats that are both sitosterolemic and hypertensive (SHR, SHRSP and WKY).

conclusionsThe rat STSL locus maps to chromosome 6q12. A non-synonymous mutation in Abcg5, Gly583Cys, results in sitosterolemia in rat strains that are also hypertensive (WKY, SHR and SHRSP). Those rat strains that are hypertensive, but not sitosterolemic (e.g. GH rat) do not have mutations in Abcg5 or Abcg8. This mutation allows for expression and apparent apical targeting of Abcg5 protein in the intestine. These rat strains may therefore allow us to study the pathophysiological mechanisms involved in the human disease of sitosterolemia.

Indexed as

Chromosome MappingGenetic VariationAnimalsIn Situ Hybridization, FluorescenceLipoproteinsMutation, MissensePhytosterolsPolymerase Chain ReactionRatsRats, Inbred SHRRats, Inbred WKYRats, Sprague-DawleyRats, WistarRNA, MessengerSitosterolsSpecies SpecificityLipoproteinsPhytosterolsRNA, MessengerSitosterols

Identifiers

PMID12783625
PMCPMC165443
OpenAlexW1715578478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.