Evidence map›Paper›PMID 12783301›Full record

ArticleHuman genetics2003

Increased prevalence of CFTR mutations and variants and decreased chloride secretion in primary sclerosing cholangitis.

Sunil Sheth, Julie C Shea, Michele D Bishop, Sanjiv Chopra, Meredith M Regan, Emily Malmberg, Carolyn Walker, Ryan Ricci, Lap-Chee Tsui, Peter R Durie and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 100 citations in OpenAlex.

  1. Review
  2. Primary Sclerosing Cholangitis and Inflammatory Bowel Disease: A Review.Journal of clinical and translational hepatology · 2022
    Review
  3. Article
  4. Article
  5. Rodent models of cholestatic liver disease: A practical guide for translational research.Liver international : official journal of the International Association for the Study of the Liver · 2021
    Review
  6. A Novel Pathogenic Variant of theJournal of pediatric genetics · 2020
    Article
  7. Review
  8. Cystic fibrosis from the gastroenterologist's perspective.Nature reviews. Gastroenterology & hepatology · 2016
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. CFTR dysfunction predisposes to fibrotic liver disease in a murine model.American journal of physiology. Gastrointestinal and liver physiology · 2012
    Article
  14. Article
  15. Cutting edge issues in primary sclerosing cholangitis.Clinical reviews in allergy & immunology · 2011
    Article
  16. Fibrosis in autoimmune and cholestatic liver disease.Best practice & research. Clinical gastroenterology · 2011
    Review
  17. Article
  18. Etiopathogenesis of primary sclerosing cholangitis.World journal of gastroenterology · 2008
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Sunil ShethDepartment of Medicine, Beth Israel Deaconess Medical Center/Harvard Medical School, Dana 532, 330 Brookline Avenue, Boston, MA 02215, USA.
Julie C Shea
Michele D Bishop
Sanjiv Chopra
Meredith M Regan
Emily Malmberg
Carolyn Walker
Ryan Ricci
Lap-Chee Tsui
Peter R Durie
Julian Zielenski
Steven D Freedman
University of Toronto · CABeth Israel Deaconess Medical Center · USHarvard University · US

Funding

ZINC STATUS AND T CELL DISORDER IN MILD HUMAN ZINC DEFICIENCYM01RR001032 · NCRR · BETH ISRAEL DEACONESS MEDICAL CENTER · PI MANTZOROS, CHRISTOS S · 1985 to 2008
$32.3M
NCRR NIH HHS RR 01032NIH HHS 5PJODK 49096
6 · The paper itself

Abstract

Primary sclerosing cholangitis (PSC) and cystic fibrosis (CF) are both slowly progressive cholestatic liver diseases characterized by fibro-obliterative inflammation of the biliary tract. We hypothesized that dysfunction of the CF gene product, cystic fibrosis transmembrane conductance regulator (CFTR), may explain why a subset of patients with inflammatory bowel disease develop PSC. We prospectively evaluated CFTR genotype and phenotype in patients with PSC ( n=19) compared with patients with inflammatory bowel disease and no liver disease ( n=18), primary biliary cirrhosis ( n=17), CF ( n=81), and healthy controls ( n=51). Genetic analysis of the CFTR gene in PSC patients compared with disease controls (primary biliary cirrhosis and inflammatory bowel disease) demonstrated a significantly increased number of mutations/variants in the PSC group (37% vs 8.6% of disease controls, P=0.02). None of the PSC patients carried two mutations/variants. Of PSC patients, 89% carried the 1540G-variant-containing genotypes (resulting in decreased functional CFTR) compared with 57% of disease controls ( P=0.03). Only one of 19 PSC patients had neither a CFTR mutation nor the 1540G variant. CFTR chloride channel function assessed by nasal potential difference testing demonstrated a reduced median isoproterenol response of 14 mV in PSC patients compared with 19 mV in disease controls ( P=0.04) and 21 mV in healthy controls ( P=0.003). These data indicate that there is an increased prevalence of CFTR abnormalities in PSC as demonstrated by molecular and functional analyses and that these abnormalities may contribute to the development of PSC in a subset of patients with inflammatory bowel disease.

Indexed as

MutationAction PotentialsAdultAgedCase-Control StudiesChloride ChannelsChloridesCholangitis, SclerosingCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorFemaleGenetic TestingGenetic VariationGenotypeHumansInflammatory Bowel DiseasesCFTR protein, humanChloride ChannelsChloridesCystic Fibrosis Transmembrane Conductance Regulator

Identifiers

PMID12783301
OpenAlexW2073485174

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.