Evidence map›Paper›PMID 12777053›Full record

ArticlePlant molecular biology2003

Oscillation of mRNA level and activity of granule-bound starch synthase I in Arabidopsis leaves during the day/night cycle.

Germán Tenorio, Alicia Orea, José M Romero, Angel Mérida

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Article in Plant molecular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 77 citations in OpenAlex.

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  15. The Importance of the Circadian Clock in Regulating Plant Metabolism.International journal of molecular sciences · 2017
    Review
  16. Article
  17. Phytochrome A and B Regulate Primary Metabolism inFrontiers in plant science · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Germán TenorioInstituto de Bioquímica Vegetal y Fotosíntesis CSIC-USE, Avda Américo Vespucio s/n. Isla de la Cartuja, 41092-Sevilla.
Alicia Orea
José M Romero
Angel Mérida
Consejo Superior de Investigaciones Científicas · ESCentro de Investigaciones Científicas Isla de la Cartuja · ESInstituto de Bioquímica Vegetal y Fotosíntesis · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Granule-bound starch synthase (GBSSI) is one of the most extensively studied enzymes of the starch synthesis pathway and its role in the synthesis of amylose has been well established. However, few studies have been carried out to characterize the regulation of GBSSI gene. Regulation of starch synthesis genes is especially interesting in photosynthetic tissues, where starch is subjected to a periodical alternation of synthesis and degradation during the day/night cycle. In this report we show a circadian oscillation of GBSSI mRNA levels in leaves of Arabidopsis during the day/night cycle, and provide evidence that GBSSI expression is controlled by the transcription factors CCA1 and LHY. Over-expression of both CCA1 and LHY genes causes the elimination of GBSSI mRNA oscillation. Binding shift assays indicate that this control may be exerted through a direct interaction of those regulatory proteins with the GBSSI promoter. Oscillation is not observed on the GBSSI protein levels, which remains constant along the cycle. However, GBSSI activity shows a clear oscillation with a period of 24 h that is altered in transgenic plants over-expressing CCA1. Possible mechanisms controlling GBSSI activity during the day/night cycle are discussed.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceCircadian RhythmDNA-Binding ProteinsDNA, PlantElectrophoretic Mobility Shift AssayGene Expression Regulation, EnzymologicGene Expression Regulation, PlantMolecular Sequence DataMutationPlant LeavesPlants, Genetically ModifiedPromoter Regions, GeneticProtein BindingRNA, MessengerArabidopsis ProteinsCCA1 protein, ArabidopsisDNA-Binding ProteinsDNA, Plantgranule-bound starch synthase ILHY protein, ArabidopsisRNA, MessengerStarch SynthaseTranscription Factors

Identifiers

PMID12777053
OpenAlexW219075714

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.