ArticleEMBO reports2003
Covariations in the nuclear chloroplast transcriptome reveal a regulatory master-switch.
Article in EMBO reports, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.
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Who cites it
48 citing papers in PubMed, 127 citations in OpenAlex.
- Regulatory and retrograde signaling networks in the chlorophyll biosynthetic pathway.Journal of integrative plant biology · 2025Review
- Genomic Analysis of Plastid-Nuclear Interactions and Differential Evolution Rates in Coevolved Genes across Juglandaceae Species.Genome biology and evolution · 2023Article
- Research progress on maintaining chloroplast homeostasis under stress conditions: a review.Acta biochimica et biophysica Sinica · 2023Review
- Tetrapyrrole biosynthesis pathway regulates plastid-to-nucleus signaling by controlling plastid gene expression in plants.Plant communications · 2023Article
- Loss of key endosymbiont genes may facilitate early host control of the chromatophore iniScience · 2022Article
- Metabolic signatures of Arabidopsis thaliana abiotic stress responses elucidate patterns in stress priming, acclimation, and recovery.Stress biology · 2022Article
- Amoeba Genome Reveals Dominant Host Contribution to Plastid Endosymbiosis.Molecular biology and evolution · 2021Article
- Seed Dormancy Involves a Transcriptional Program That Supports Early Plastid Functionality during Imbibition.Plants (Basel, Switzerland) · 2018Article
- Acceleration of leaf senescence is slowed down in transgenic barley plants deficient in the DNA/RNA-binding protein WHIRLY1.Journal of experimental botany · 2017Article
- The Coordination of Gene Expression within Photosynthesis Pathway for Acclimation of C4 Energy Crop Miscanthus lutarioriparius.Frontiers in plant science · 2016Article
- Characterization of chloroplast protein import without Tic56, a component of the 1-megadalton translocon at the inner envelope membrane of chloroplasts.Plant physiology · 2015Article
- Identification and characterization of nuclear genes involved in photosynthesis in Populus.BMC plant biology · 2014Article
- Fast retrograde signaling in response to high light involves metabolite export, MITOGEN-ACTIVATED PROTEIN KINASE6, and AP2/ERF transcription factors in Arabidopsis.The Plant cell · 2014Article
- PsbN is required for assembly of the photosystem II reaction center in Nicotiana tabacum.The Plant cell · 2014Article
- Plastid-bearing sea slugs fix CO2 in the light but do not require photosynthesis to survive.Proceedings. Biological sciences · 2014Article
- A model for tetrapyrrole synthesis as the primary mechanism for plastid-to-nucleus signaling during chloroplast biogenesis.Frontiers in plant science · 2013Article
- Common and specific protein accumulation patterns in different albino/pale-green mutants reveals regulon organization at the proteome level.Plant physiology · 2012Article
- Article
- Efficient acclimation of the chloroplast antioxidant defence of Arabidopsis thaliana leaves in response to a 10- or 100-fold light increment and the possible involvement of retrograde signals.Journal of experimental botany · 2012Article
- ABI4 and its role in chloroplast retrograde communication.Frontiers in plant science · 2012Article
Corrections and comments
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Authors and funding
8 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The evolution of the endosymbiotic progenitor into the chloroplast organelle was associated with the transfer of numerous chloroplast genes into the nucleus. Hence, inter-organellar signalling, and the co-ordinated expression of sets of nuclear genes, was set up to control the metabolic and developmental status of the chloroplast. Here, we show by the differential-expression analysis of 3,292 genes, that most of the 35 environmental and genetic conditions tested, including plastid signalling mutations, elicit only three main classes of response from the nuclear chloroplast transcriptome. Two classes, probably involving GUN (genomes uncoupled)-type plastid signalling, are characterized by alterations, in opposite directions, in the expression of largely overlapping sets of genes.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.