Evidence map›Paper›PMID 12773556›Full record

ArticleMolecular and cellular biology2003

Effect of damage type on stimulation of human excision nuclease by SWI/SNF chromatin remodeling factor.

Ryujiro Hara, Aziz Sancar

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Molecular mechanisms and genomic maps of DNA excision repair inThe Journal of biological chemistry · 2017
    Review
  8. Chromatin remodelers: We are the drivers!!Nucleus (Austin, Tex.) · 2016
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. UV damage in DNA promotes nucleosome unwrapping.The Journal of biological chemistry · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ryujiro HaraDepartment of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599, USA.
Aziz Sancar
University of North Carolina at Chapel Hill · US

Funding

STRUCTURE AND FUNCTION OF UVRABC EXCISION NUCLEASER01GM032833 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SANCAR, AZIZ · 1985 to 2015
$8.9M
NIGMS NIH HHS GM32833NIGMS NIH HHS R01 GM032833
6 · The paper itself

Abstract

To investigate the repair of different types of DNA lesions in chromatin, we prepared mononucleosomes containing an acetylaminofluorene-guanine adduct (AAF-G), a (6-4) photoproduct, or a cyclobutane pyrimidine dimer (CPD) and measured the repair of these lesions by reconstituted 6-factor human excision nuclease. We find that incorporation into nucleosomes inhibits the repair of CPD more severely than repair of the AAF-G adduct and the (6-4) photoproduct. Equally important, we find that SWI/SNF stimulates the removal of AAF-G and (6-4) photoproduct but not of CPD from nucleosomal DNA. These results shed new light on the low rate of repair of CPDs in human cells in vivo.

Indexed as

DNA Repair2-AcetylaminofluoreneBase SequenceChromatinChromosomal Proteins, Non-HistoneDeoxyguanosineDeoxyribonuclease IDeoxyribonucleasesDimerizationDNA DamageElectrophoresis, Polyacrylamide GelEndodeoxyribonucleasesEscherichia coli ProteinsHeLa CellsHumansLight2-AcetylaminofluoreneChromatinChromosomal Proteins, Non-HistoneDeoxyguanosineDeoxyribonuclease IDeoxyribonucleasesEndodeoxyribonucleasesendodeoxyribonuclease uvrABCEscherichia coli ProteinsN-(deoxyguanosin-8-yl)acetylaminofluoreneNucleosomesPyrimidine DimersSWI-SNF-B chromatin-remodeling complexTranscription Factors

Identifiers

PMID12773556
PMCPMC156126
OpenAlexW2126779104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.