Evidence map›Paper›PMID 12771925›Full record

ArticleBritish journal of cancer2003

Cytogenetic alterations in ovarian clear cell carcinoma detected by comparative genomic hybridisation.

J Dent, G D Hall, N Wilkinson, T J Perren, I Richmond, A F Markham, H Murphy, S M Bell

Abstract read
In one paragraph

Article in British journal of cancer, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Cancer genomics: why rare is valuable.Journal of molecular medicine (Berlin, Germany) · 2015
    Review
  4. Article
  5. Article
  6. ARID1A mutations in endometriosis-associated ovarian carcinomas.The New England journal of medicine · 2010
    Article
  7. DNA copy numbers profiles in affinity-purified ovarian clear cell carcinoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2010
    Article
  8. Article
  9. Ovarian cancer.Annual review of pathology · 2009
    Review
  10. Article
  11. Ovarian clear cell adenocarcinoma: a continuing enigma.Journal of clinical pathology · 2007
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

J DentCancer Research UK Clinical Cancer Centre in Leeds, St James's University Hospital, Leeds LS9 7TF, UK. drjodent@hotmail.com
G D Hall
N Wilkinson
T J Perren
I Richmond
A F Markham
H Murphy
S M Bell

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ovarian clear cell carcinoma (OCCC) accounts for a small but significant proportion of all ovarian cancers and is a distinct clinical and pathological entity. It tends to be associated with poorer response rates to chemotherapy and with a worse prognosis. Little is known about possible underlying genetic changes. DNA extracted from paraffin-embedded samples of 18 pure OCCC cases was analysed for genetic imbalances using comparative genomic hybridisation (CGH). All of the 18 cases showed genomic alterations. The mean number of alterations detected by CGH was 6 (range 1-15) indicating a moderate level of genetic instability. Chromosome deletions were more common than amplifications. The most prominent change involved chromosome 9 deletions in 10 cases (55%). This correlates with changes seen in other epithelial ovarian cancers. This deletion was confirmed using microsatellite markers to assess loss of heterozygosity (LOH) at four separate loci on chromosome 9. The most distinct region of loss detected was around the IFNA marker at 9p21 with 41% (11 out of 27 cases) LOH. Other frequent deletions involved 1p (five out of 18; 28%); 11q (four out of 18; 22%) and 16 (five out of 18; 28%). Amplification was most common at chromosome 3 (six out of 18; 33%); 13q (four out of 18; 22%) and 15 (three out of 18; 17%). No high-level amplifications were identified. These features may serve as useful prognostic indicators in the management of OCCC.

Indexed as

Gene DeletionNucleic Acid HybridizationAdenocarcinoma, Clear CellChromosomes, Human, Pair 9DNA, NeoplasmFemaleHumansLoss of HeterozygosityOvarian NeoplasmsDNA, Neoplasm

Identifiers

PMID12771925
PMCPMC2377123

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.