Evidence map›Paper›PMID 12771194›Full record

ArticleThe Journal of general physiology2003

Negative charges in the transmembrane domains of the HERG K channel are involved in the activation- and deactivation-gating processes.

Jie Liu, Mei Zhang, Min Jiang, Gea-Ny Tseng

Open access · greenAbstract read
In one paragraph

Article in The Journal of general physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Molecular Determinants of Voltage-Dependent Gating in Kv11.1 Channels.Advances in experimental medicine and biology · 2026
    Review
  3. Rare pathogenic mutation ofFrontiers in cardiovascular medicine · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Modulation of hERG KFrontiers in pharmacology · 2020
    Review
  9. The EAG Voltage-Dependent KFrontiers in pharmacology · 2020
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jie LiuDepartment of Physiology, Virginia Commonwealth University, Richmond 23298, USA.
Mei Zhang
Min Jiang
Gea-Ny Tseng
Virginia Commonwealth University · US

Funding

K+ CHANNELS--STRUCTURE/FUNCTION RELATION &PHARMACOLOGYR01HL046451 · NHLBI · VIRGINIA COMMONWEALTH UNIVERSITY · PI TSENG, GEA-NY · 1994 to 2006
$1.7M
NHLBI NIH HHS HL 46451NHLBI NIH HHS R01 HL046451
6 · The paper itself

Abstract

The transmembrane domains of HERG (S1-S3) contain six negative charges: three are conserved in all voltage-gated K channels (D456 and D466 in S2, D501 in S3) and three are unique to the EAG family (D411 in S1, D460 in S2, and D509 in S3). We infer the functional role of these aspartates by studying how substituting them with cysteine, one at a time, affects the channel function. D456C is not functional, suggesting that this negative charge may play a critical role in channel protein folding during biogenesis, as has been shown for its counterpart in the Shaker channel. Data from the other five functional mutants suggest that D411 can stabilize the HERG channel in the closed state, while D460 and D509 have the opposite effect. D466 and D501 both may contribute to voltage-sensing during the activation process. On the other hand, all five aspartates work in a concerted fashion in contributing to the slow deactivation process of the HERG channel. Accessibility tests of the introduced thiol groups to extracellular MTS reagents indicate that water-filled crevices penetrate deep into the HERG protein core, reaching the cytoplasmic halves of S1 and S2. At these deep locations, accessibility of 411C and 466C to the extracellular aqueous phase is voltage dependent, suggesting that conformational changes occur in S1 and S2 or the surrounding crevices during gating. Increasing extracellular [H+] accelerates HERG deactivation. This effect is suppressed by substituting the aspartates with cysteine, suggesting that protonation of these aspartates may contribute to the signaling pathway whereby external [H+] influences conformational changes in the channel's cytoplasmic domains (where deactivation takes place). There is no evidence for a metal ion binding site coordinated by negative charges in the transmembrane domains of HERG, as the one described for the EAG channel.

Indexed as

Cation Transport ProteinsAmino Acid SequenceAnimalsAspartic AcidCysteineElectrophysiologyEther-A-Go-Go Potassium ChannelsIon Channel GatingMembrane PotentialsMolecular Sequence DataMutagenesis, Site-DirectedOocytesPotassium ChannelsPotassium Channels, Voltage-GatedXenopusAspartic AcidCation Transport ProteinsCysteineEther-A-Go-Go Potassium ChannelsKCNH6 protein, humanPotassium ChannelsPotassium Channels, Voltage-Gated

Identifiers

PMID12771194
PMCPMC2217355
OpenAlexW1996049812

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.