Evidence map›Paper›PMID 12771180›Full record

ArticleThe Journal of experimental medicine2003

Identification of a polymorphic gene, BCL2A1, encoding two novel hematopoietic lineage-specific minor histocompatibility antigens.

Yoshiki Akatsuka, Tetsuya Nishida, Eisei Kondo, Mikinori Miyazaki, Hirohumi Taji, Hiroatsu Iida, Kunio Tsujimura, Makoto Yazaki, Tomoki Naoe, Yasuo Morishima and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it, 145 citations in OpenAlex.

  1. Pooled it
  2. Effects of mismatching for minor histocompatibility antigens on clinical outcomes in HLA-matched, unrelated hematopoietic stem cell transplants.Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation · 2009
    Trial
  3. Review
  4. Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. The Graft-Versus-Leukemia Effect in AML.Frontiers in oncology · 2019
    Review
  13. Frontiers in immunology · 2018
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Adoptive T-cell therapy for Leukemia.Molecular and cellular therapies · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Yoshiki AkatsukaDivision of Immunology, Aichi Cancer Center Research Institute, 1-1 Kanokoden, Chikusa-ku, Nagoya 464-8681, Japan. yakatsuk@aichi-cc.jp
Tetsuya Nishida
Eisei Kondo
Mikinori Miyazaki
Hirohumi Taji
Hiroatsu Iida
Kunio Tsujimura
Makoto Yazaki
Tomoki Naoe
Yasuo Morishima
Yoshihisa Kodera
Kiyotaka Kuzushima
Toshitada Takahashi
Aichi Cancer Center · JPNagoya University · JPMeitetsu Hospital · JP

Funding

13TH INTERNATIONAL HISTOCOMPATIBILITY WORKING GROUPU24AI049213 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HANSEN, JOHN ANDREW · 2000 to 2004
$21.3M
NIAID NIH HHS AI49213NIAID NIH HHS U24 AI049213
6 · The paper itself

Abstract

We report the identification of two novel minor histocompatibility antigens (mHAgs), encoded by two separate single nucleotide polymorphisms on a single gene, BCL2A1, and restricted by human histocompatibility leukocyte antigen (HLA)-A*2402 (the most common HLA-A allele in Japanese) and B*4403, respectively. Two cytotoxic T lymphocyte (CTL) clones specific for these mHAgs were first isolated from two distinct recipients after hematopoietic cell transplantation. Both clones lyse only normal and malignant cells within the hematopoietic lineage. To localize the gene encoding the mHAgs, two-point linkage analysis was performed on the CTL lytic patterns of restricting HLA-transfected B lymphoblastoid cell lines obtained from Centre d'Etude du Polymorphisme Humain. Both CTL clones showed a completely identical lytic pattern for 4 pedigrees and the gene was localized within a 3.6-cM interval of 15q24.3-25.1 region that encodes at least 46 genes. Of those, only BCL2A1 has been reported to be expressed in hematopoietic cells and possess three nonsynonymous nucleotide changes. Minigene transfection and epitope reconstitution assays with synthetic peptides identified both HLA-A*2402- and B*4403-restricted mHAg epitopes to be encoded by distinct polymorphisms within BCL2A1.

Indexed as

Amino Acid SequenceBase SequenceCell LineDNA, ComplementaryFemaleGenetic LinkageHematopoietic Stem Cell TransplantationHLA-A AntigensHumansJapanMaleMinor Histocompatibility AntigensMinor Histocompatibility LociMolecular Sequence DataPedigreePolymorphism, Single NucleotideBCL2-related protein A1DNA, ComplementaryHLA-A AntigensMinor Histocompatibility AntigensProto-Oncogene Proteins c-bcl-2

Identifiers

PMID12771180
PMCPMC2193899
OpenAlexW2103255385

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.