Evidence map›Paper›PMID 12768435›Full record

ArticleJournal of human genetics2003

Identification of mutations in the Bruton's tyrosine kinase gene, including a novel genomic rearrangements resulting in large deletion, in Korean X-linked agammaglobulinemia patients.

Eun-Kyeong Jo, Yue Wang, Hirokazu Kanegane, Takeshi Futatani, Chang-Hwa Song, Jeong-Kyu Park, Jung Soo Kim, Dong Soo Kim, Kang-Mo Ahn, Sang-Il Lee and 4 more

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Article in Journal of human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Eun-Kyeong JoDepartment of Microbiology, College of Medicine, Chungnam National University, Daejeon, Korea.
Yue WangDepartment of Pediatrics, Faculty of Medicine, Toyama Medical and Pharmaceutical University, 2630 Sugitani, Toyama 930-0194, Japan.
Hirokazu KaneganeDepartment of Pediatrics, Faculty of Medicine, Toyama Medical and Pharmaceutical University, 2630 Sugitani, Toyama 930-0194, Japan. kanegane@ms.toyama-mpu.ac.jp.
Takeshi FutataniDepartment of Pediatrics, Faculty of Medicine, Toyama Medical and Pharmaceutical University, 2630 Sugitani, Toyama 930-0194, Japan.
Chang-Hwa SongDepartment of Microbiology, College of Medicine, Chungnam National University, Daejeon, Korea.
Jeong-Kyu ParkDepartment of Microbiology, College of Medicine, Chungnam National University, Daejeon, Korea.
Jung Soo KimDepartment of Pediatrics, Chonbuk National University Medical School, Jeonbuk, Korea.
Dong Soo KimDepartment of Pediatrics, Yonsei University College of Medicine, Seoul, Korea.
Kang-Mo AhnDepartment of Pediatrics, Samsung Medical Center, Seoul, Korea.
Sang-Il LeeDepartment of Pediatrics, Samsung Medical Center, Seoul, Korea.
Hyeon Jin ParkDepartment of Pediatrics, College of Medicine, Chungbuk National University, Chungbuk, Korea.
Youn Soo HahnDepartment of Pediatrics, College of Medicine, Chungbuk National University, Chungbuk, Korea.
Jae-Ho LeeDepartment of Pediatrics, College of Medicine, Chungnam National University, Daejeon, Korea.
Toshio MiyawakiDepartment of Pediatrics, Faculty of Medicine, Toyama Medical and Pharmaceutical University, 2630 Sugitani, Toyama 930-0194, Japan.
Chungnam National University · KRTohoku Medical and Pharmaceutical University · JPChungbuk National University · KRSamsung Medical Center · KRJeonbuk National University · KRToyama University Hospital · JPYonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in the Bruton's tyrosine kinase ( BTK) gene are responsible for X-linked agammaglobulinemia (XLA). We identified BTK mutations in six patients with presumed XLA from unrelated Korean families. Four out of six mutations were novel: two missense mutations (P565T, C154Y), a point mutation in a splicing donor site (IVS11+1G>A), and a large deletion (a 6.1-kb deletion including BTK exons 11-18). The large deletion, identified by long-distance PCR, revealed Alu-Alu mediated recombination extended from an Alu sequence in intron 10 to another Alu sequence in intron 18, spanning a distance of 6.1 kb. The two known mutations consisted of one missense (G462D) mutation, and a point mutation in a splicing acceptor site (IVS7-9A>G). This study suggests that large genomic rearrangements involving Alu repeats are few but an important component of the spectrum of BTK mutations.

Indexed as

Chromosomes, Human, XMutationAgammaglobulinaemia Tyrosine KinaseAgammaglobulinemiaAlu ElementsBase SequenceChildChild, PreschoolGenetic LinkageHumansKoreaMaleMolecular Sequence DataProtein-Tyrosine KinasesTandem Repeat SequencesAgammaglobulinaemia Tyrosine KinaseBTK protein, humanProtein-Tyrosine Kinases

Identifiers

PMID12768435
OpenAlexW1494513860

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.