ArticlePlanta2003
Seasonal variation in transcript accumulation in wood-forming tissues of maritime pine (Pinus pinaster Ait.) with emphasis on a cell wall glycine-rich protein.
Article in Planta, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- De novo assembled nuclear, chloroplast, and mitochondrial genomes show high intraspecific variation in the tropical rainforest species Symphonia globulifera.G3 (Bethesda, Md.) · 2025Article
- Fungal communities represent the majority of root-specific transcripts in the transcriptomes ofPeerJ · 2022Article
- A Talk between Flavonoids and Hormones to Reorient the Growth of Gymnosperms.International journal of molecular sciences · 2021Review
- The Sisal Virome: Uncovering the Viral Diversity ofMicroorganisms · 2021Article
- The Cytoskeleton and Its Role in Determining Cellulose Microfibril Angle in Secondary Cell Walls of Woody Tree Species.Plants (Basel, Switzerland) · 2020Review
- Article
- High-throughput transcriptome sequencing and preliminary functional analysis in four Neotropical tree species.BMC genomics · 2014Article
- Transcriptome sequencing and profiling of expressed genes in cambial zone and differentiating xylem of Japanese cedar (Cryptomeria japonica).BMC genomics · 2014Article
- The transcriptomics of secondary growth and wood formation in conifers.Molecular biology international · 2013Review
- Differentially expressed genes and proteins upon drought acclimation in tolerant and sensitive genotypes of Coffea canephora.Journal of experimental botany · 2012Article
- Proteomic profiling of proteins associated with the rejuvenation of Sequoia sempervirens (D. Don) Endl.Proteome science · 2010Article
- (Not) Keeping the stem straight: a proteomic analysis of maritime pine seedlings undergoing phototropism and gravitropism.BMC plant biology · 2010Article
- Article
- Dynamic changes in transcripts during regeneration of the secondary vascular system in Populus tomentosa Carr. revealed by cDNA microarrays.BMC genomics · 2009Article
- The response of Spartium junceum roots to slope: anchorage and gene factors.Annals of botany · 2006Article
- Wood formation from the base to the crown in Pinus radiata: gradients of tracheid wall thickness, wood density, radial growth rate and gene expression.Plant molecular biology · 2006Article
- Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.BMC genomics · 2005Article
- Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences.Plant molecular biology · 2004Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Wood formation is being increasingly studied at cellular and biochemical levels; however, gene expression and regulation during wood formation remain poorly understood. Up to six types of wood can be studied within the same tree (early wood, late wood, juvenile wood, mature wood, reaction wood and opposite wood). These six types are characterized by different chemical, physical and anatomical properties. Using the cDNA-amplified fragment length polymorphism (AFLP) technique, we screened several thousand cDNA fragments from differentiating xylem of maritime pine (Pinus pinaster Ait.) comparing early wood vs. late wood and compression wood vs. opposite wood after 8 or 120 days of bending. About 100 transcript-derived fragments (TDFs) showed qualitative or quantitative variations between these different samples. The relative abundance of these TDFs was subsequently analyzed by reverse Northern using RNA derived from early and late wood. Analysis of variance (ANOVA) was used to identify differentially expressed TDFs ( P<0.01) and reverse transcription-polymerase chain reaction to confirm the differential expression of some TDFs. Among the genes with a known function, transcript expression and nucleotide sequence variation analysis showed a cell wall glycine-rich protein to be a strong candidate gene for wood properties.
Indexed as
Identifiers
12768425What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.