Evidence map›Paper›PMID 12756533›Full record

ArticleMolecular genetics and genomics : MGG2003

Construction of a mitotic linkage map of Fusarium oxysporum based on Foxy-AFLPs.

H A S Teunissen, M Rep, P M Houterman, B J C Cornelissen, M A Haring

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In one paragraph

Article in Molecular genetics and genomics : MGG, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Population genomics reveals meiotic recombination inProceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

H A S TeunissenPlant Pathology, Swammerdam Institute for Life Sciences, University of Amsterdam, P.O. Box 94062, The Netherlands.
M Rep
P M Houterman
B J C Cornelissen
M A Haring
University of Amsterdam · NLNetherlands Institute for Neuroscience · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Construction of the first mitotic linkage map of the asexual fungus Fusarium oxysporum, based on a population of 32 parasexual fusion products, is reported. Molecular markers were developed using a modified AFLP technique which combines a Foxy-specific primer with standard adapter primers. The retroposon Foxy is abundantly present and highly variable in location in F. oxysporum isolates: 43% of the Foxy-AFLP markers tested appeared to be polymorphic between the strains Fol004 and Fol029. Of the 102 Foxy markers obtained, 83 segregated in a 1:1 ratio. The remaining fragments showed a skewed segregation pattern in which the Fol004 derived Foxy fragments were overrepresented. Foxy markers were observed to be clustered, suggesting that active Foxy elements may not transpose very far from their initial insertion sites, or that hotspots for insertion may exist. Linkage analysis revealed 23 linkage groups. Physical linkage between segregating markers predicted to be 20 cM apart was confirmed, indicating that the mitotic linkage map is reliable.

Indexed as

Genetic LinkageMitosisPolymorphism, GeneticCloning, MolecularDNA Transposable ElementsEscherichia coliFusariumGene LibraryGenetic MarkersGenotypeLod ScoreModels, GeneticNucleic Acid HybridizationPhylogenyDNA Transposable ElementsGenetic Markers

Identifiers

PMID12756533
OpenAlexW2173275315

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.