Evidence map›Paper›PMID 12756532›Full record

ArticleMolecular genetics and genomics : MGG2003

A candidate-gene approach to clone the sorghum Brown midrib gene encoding caffeic acid O-methyltransferase.

S Bout, W Vermerris

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Article in Molecular genetics and genomics : MGG, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed.

  1. A NovelPlants (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Article
  4. Engineered reduction of S-adenosylmethionine alters lignin in sorghum.Biotechnology for biofuels and bioproducts · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Frontiers in plant science · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. SorghumGenes · 2021
    Article
  13. Article
  14. The Sorghum (Frontiers in plant science · 2021
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

S BoutDepartment of Agronomy, Purdue University, 915 W. State Street, West Lafayette, IN 47907-2054, USA.
W Vermerris

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The brown midrib (bmr) mutants of sorghum have brown vascular tissue in the leaves and stem as a result of changes in lignin composition. The bmr mutants were generated via chemical mutagenesis with diethyl sulfate (DES) and resemble the brown midrib (bm) mutants of maize. The maize and sorghum brown midrib mutants are of particular value for the comparison of lignin biosynthesis across different, yet evolutionarily related, species. Although the sorghum brown midrib mutants were first described in 1978, none of the Brown midrib genes have been cloned. We have used a candidate-gene approach to clone the first Brown midrib gene from sorghum. Based on chemical analyses of the allelic mutants bmr12, bmr18 and bmr26, we hypothesized that these mutants had reduced activity of the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT). After a northern analysis revealed strongly reduced expression of the COMT gene, the gene was cloned from the mutants and the corresponding wild types using PCR. In all three mutants, point mutations resulting in premature stop codons were identified: bmr12, bmr18 and bmr26 are therefore mutant alleles of the gene encoding COMT. RT-PCR indicated that all three mutants express the mutant allele, but at much lower levels relative to the wild-type controls. Molecular markers were developed for each of the three mutant alleles to facilitate the use of these mutant alleles in genetic studies and breeding programs.

Indexed as

AllelesBlotting, NorthernCell WallCloning, MolecularCodon, NonsenseGas Chromatography-Mass SpectrometryGenetic MarkersLigninMethyltransferasesMolecular Sequence DataMutationPanicumPolymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSequence Analysis, DNAcaffeate O-methyltransferaseCodon, NonsenseGenetic MarkersLigninMethyltransferasesRNA, Messenger

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.