Evidence map›Paper›PMID 12750963›Full record

ArticleJournal of human genetics2003

Association of positional and functional candidate genes FGF1, FBN2, and LOX on 5q31 with intracranial aneurysm.

Taku Yoneyama, Hidetoshi Kasuya, Hideaki Onda, Hiroyuki Akagawa, Nobuyoshi Jinnai, Toshiaki Nakajima, Tomokatsu Hori, Ituro Inoue

Open access · bronzeAbstract readComparative Study
PubMed Publisher
In one paragraph

Article in Journal of human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  7. Review
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  9. Review
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  11. Review
  12. Article
  13. The genetics of intracranial aneurysms.Journal of human genetics · 2006
    Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Taku YoneyamaDepartment of Neurosurgery, Neurological Institute, Tokyo Women's Medical University, Tokyo, Japan.
Hidetoshi KasuyaDepartment of Neurosurgery, Neurological Institute, Tokyo Women's Medical University, Tokyo, Japan.
Hideaki OndaDepartment of Neurosurgery, Neurological Institute, Tokyo Women's Medical University, Tokyo, Japan.
Hiroyuki AkagawaDepartment of Neurosurgery, Neurological Institute, Tokyo Women's Medical University, Tokyo, Japan.
Nobuyoshi JinnaiTheranostics Research Center, Otsuka Pharmaceutical Company, Tokushima, Japan.
Toshiaki NakajimaDivision of Genetic Diagnosis, The Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan.
Tomokatsu HoriDepartment of Neurosurgery, Neurological Institute, Tokyo Women's Medical University, Tokyo, Japan.
Ituro InoueDivision of Genetic Diagnosis, The Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan. ituro@ims.u-tokyo.ac.jp.
Tokyo Women's Medical University · JPThe University of Tokyo · JPOtsuka (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We previously performed a genome-wide linkage study of intracranial aneurysm (IA) and found positive evidence of linkage at chromosomes 5q22-31, 7q11, and 14q22. In the present study, we focus on 5q31, where three candidate genes, fibroblast growth factor 1 (FGF1), fibrillin 2 (FBN2), and lysyl oxidase gene ( LOX) lie, and evaluate associations with IA. Genomic DNAs were obtained from 172 IA patients and 192 controls. Association analysis was performed with ten, five, and four single-nucleotide polymorphisms (SNPs) identified in FGF1, FBN2, and LOX, respectively. A difference in allelic frequency was observed for only the SNP at intron 4 in FGF1 (chi(2)=4.44, df=1, P=0.035). Although a haplotype association was observed with the combination of ten SNPs in FGF1 (chi(2)=16.04, df=1, P=0.00006), significant haplotype associations were not observed when haplotypes were constructed with the three, two, and four SNPs in FGF1 according to the linkage disequilibrium structure. No associations of FBN2 and LOX with IA were detected in the present study.

Indexed as

AgedCase-Control StudiesChromosomes, Human, Pair 5FemaleFibrillin-2FibrillinsFibroblast Growth Factor 1Gene FrequencyHaplotypesHumansIntracranial AneurysmIntronsLinkage DisequilibriumMaleMicrofilament ProteinsMiddle AgedFBN2 protein, humanFibrillin-2FibrillinsFibroblast Growth Factor 1Microfilament ProteinsProtein-Lysine 6-Oxidase

Identifiers

PMID12750963
OpenAlexW1595476093

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.