Evidence map›Paper›PMID 12746538›Full record

ArticlePlant physiology2003

Solubilization of an arabinan arabinosyltransferase activity from mung bean hypocotyls.

Kylie Joy Nunan, Henrik Vibe Scheller

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  6. XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  7. Article
  8. Article
  9. Biosynthesis of pectin.Plant physiology · 2010
    Review
  10. Article
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  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kylie Joy NunanPlant Biochemistry Laboratory, Department of Plant Biology, The Royal Veterinary and Agricultural University, 1871 Frederiksberg C, Copenhagen, Denmark.
Henrik Vibe Scheller

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The biosynthesis of polysaccharides destined for the plant cell wall and the subsequent assembly of the cell wall are poorly understood processes that are currently the focus of much research. Arabinan, a component of the pectic polysaccharide rhamnogalacturonan I, is composed of arabinosyl residues connected via various glycosidic linkages, and therefore, the biosynthesis of arabinan is likely to involve more than one arabinosyltransferase. We have studied the transfer of [(14)C]arabinose (Ara) from UDP-L-arabinopyranose onto polysaccharides using microsomal membranes isolated from mung bean (Vigna radiata) hypocotyls. [(14)C]arabinosyl and [(14)C]xylosyl residues were incorporated into endogenous products due to the presence of UDP-Xyl-4-epimerase activity. Enzymatic digestion of endogenous products with endo-arabinanase released very little radiolabeled sugars, whereas digestion with arabinofuranosidase released some [(14)C]Ara. Microsomal membranes solubilized with the detergent octyl glucoside were able to add a single [(14)C]Ara residue onto (1-->5)-linked alpha-L-arabino-oligosaccharide acceptors. The reaction had a pH optimum of 6.5 and a requirement for manganese ions. However, enzymatic digestion of the radiolabeled oligosaccharides with endo-arabinanase and arabinofuranosidases could not fully release the radiolabeled Ara residue, indicating that the [(14)C]Ara residue was not a (1-->2)-, (1-->3)-, or (1-->5)-linked alpha-L-arabinofuranosyl residue. Rather, mild acid treatment of the product suggested that the radiolabeled Ara residue was in a pyranose conformation, and this result was confirmed by thin-layer chromatography of radiolabeled partially methylated sugars. Using microsomal membranes separated on a discontinuous sucrose gradient, the arabinosyltransferase activity appears to be mainly localized to Golgi membranes.

Indexed as

ArabinoseCarbon RadioisotopesCell WallEnzyme ActivationFabaceaeGolgi ApparatusGuanosine Diphosphate SugarsHypocotylMicrosomesOligosaccharidesPentosyltransferasesPolysaccharidesXylosearabanArabinosearabinosyltransferaseCarbon Radioisotopesguanidine diphosphate-arabinopyranoseGuanosine Diphosphate SugarsOligosaccharidesPentosyltransferasesPolysaccharidesXylose

Identifiers

PMID12746538
PMCPMC166978
OpenAlexW2097174216

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.