Evidence map›Paper›PMID 12743798›Full record

ArticleParasitology research2003

Molecular cloning and characterization of an SRCAP chromatin remodeling homologue in Toxoplasma gondii.

William J Sullivan, M Alexandra Monroy, Wolfgang Bohne, Karuna C Nallani, John Chrivia, Peter Yaciuk, Charles K Smith, Sherry F Queener

Abstract read
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In one paragraph

Article in Parasitology research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

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  4. Peculiarities ofInternational journal of molecular sciences · 2021
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  6. A Comparison of Stage Conversion in the Coccidian ApicomplexansFrontiers in cellular and infection microbiology · 2020
    Review
  7. A latent ability to persist: differentiation in Toxoplasma gondii.Cellular and molecular life sciences : CMLS · 2018
    Review
  8. Article
  9. Review
  10. A decade of epigenetic research in Toxoplasma gondii.Molecular and biochemical parasitology · 2010
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

William J SullivanDepartment of Pharmacology and Toxicology, Room A-527, Indiana University School of Medicine, 635 Barnhill Drive, Indianapolis, IN 46202-5120, USA. wjsulliv@iupui.edu
M Alexandra Monroy
Wolfgang Bohne
Karuna C Nallani
John Chrivia
Peter Yaciuk
Charles K Smith
Sherry F Queener
Saint Louis University · USIndiana University School of MedicineElanco (United States) · USIndiana University – Purdue University Indianapolis · USUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have identified and mapped a gene in Toxoplasma gondii that encodes a homologue of SRCAP (Snf2-related CBP activator protein), a member of the SNF/SWI family of chromatin remodeling factors. The genomic locus (TgSRCAP) is present as a single copy and contains 16 introns. The predicted cDNA contains an open reading frame of 8,775 bp and encodes a protein of 2,924 amino acids. We have identified additional SRCAP-like sequences in Apicomplexa for comparison by screening genomic databases. An analysis of SRCAP homologues between species reveals signature features that may be indicative of SRCAP members. Expression of mRNA encoding TgSRCAP is upregulated when tachyzoite (invasive form) parasites are induced to differentiate into bradyzoites (encysted form) in vitro. Recombinant TgSRCAP protein is functionally equivalent to the human homologue, being capable of increasing transcription mediated by CREB.

Indexed as

Genes, ProtozoanAdenosine TriphosphatasesAmino Acid SequenceAnimalsChromatinCloning, MolecularCREB-Binding ProteinGene Expression RegulationHeLa CellsHumansMolecular Sequence DataNuclear ProteinsRNA, MessengerSequence Homology, Amino AcidToxoplasmaTrans-ActivatorsAdenosine TriphosphatasesChromatinCREB-Binding ProteinCREBBP protein, humanNuclear ProteinsRNA, MessengerSRCAP protein, humanTrans-Activators

Identifiers

PMID12743798
OpenAlexW1499229080

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.