Evidence map›Paper›PMID 12743268›Full record

ArticleJournal of virology2003

Persistence of extraordinarily low levels of genetically homogeneous human immunodeficiency virus type 1 in exposed seronegative individuals.

Tuofu Zhu, Lawrence Corey, Yon Hwangbo, Jean M Lee, Gerald H Learn, James I Mullins, M Juliana McElrath

Abstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tuofu ZhuDepartment of Laboratory Medicine, University of Washington School of Medicine, Seattle 98195, USA. tzhu@u.washington.edu
Lawrence Corey
Yon Hwangbo
Jean M Lee
Gerald H Learn
James I Mullins
M Juliana McElrath

Funding

YILMA SIV VACCINIA VACCINE TRIALP51RR000166 · NCRR · UNIVERSITY OF WASHINGTON · PI CHAMBERLAIN, JEFFREY S · 1985 to 2011
$161.1M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Judith Tsui · 1988 to 2026
$104.9M
IMMUNOLOGY AND MOLECULAR VIROLOGY OF ACUTE HIV INFECTIONU01AI041535 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI COREY, LAWRENCE · 1997 to 2003
$6.0M
Mucosal CTL Induction After HIV Exposure &VaccinationR37AI035605 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MCELRATH, MARGARET JULIANA · 1998 to 2007
$3.4M
Role of CD14+ Monocytes in HIV-1 InfectionR01AI049109 · NIAID · UNIVERSITY OF WASHINGTON · PI ZHU, TUOFU · 2001 to 2005
$1.3M
SUPPRESSING HIV INFECTION IN EXPOSED SERONEGATIVE ADULTSR01AI045402 · NIAID · UNIVERSITY OF WASHINGTON · PI ZHU, TUOFU · 1999 to 2003
$873k
AIDS VACCINE EVALUATION UNITSN01AI045206 · NIAID · UNIVERSITY OF WASHINGTON · PI COREY, LAWRENCE · 1994 to 2000
$39k
CMIG FOR AIDS VACCINER01AI035605 · NIAID · UNIVERSITY OF WASHINGTON · PI MCELRATH, MARGARET JULIANA · 1994 to 1997
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NCRR NIH HHS P51 RR000166NCRR NIH HHS RR00166NIAID NIH HHS AI26503NIAID NIH HHS AI27757NIAID NIH HHS AI35605NIAID NIH HHS AI41535NIAID NIH HHS AI45206NIAID NIH HHS AI45402NIAID NIH HHS AI49109NIAID NIH HHS P30 AI027757NIAID NIH HHS R01 AI045402NIAID NIH HHS R01 AI049109NIAID NIH HHS R37 AI035605Wellcome Trust
6 · The paper itself

Abstract

Some individuals remain inexplicably seronegative and lack evidence for human immunodeficiency virus type 1 (HIV-1) infection by conventional serologic or virologic testing despite repeated high-risk virus exposures. Here, we examined 10 exposed seronegative (ES) individuals exhibiting HIV-1-specific cytotoxicity for the presence of HIV-1. We discovered HIV-1 DNA in resting CD4(+) T cells (mean, 0.05 +/- 0.01 copies per million cells) at multiple visits spanning 69 to 130 weeks in two ES individuals at levels that were on average 10(4)- to 10(6)-fold lower than those of other HIV-1-infected populations reported. Sequences of HIV-1 envelope and gag genes remained markedly homogeneous, indicating little to undetectable virus replication. These results provide the evidence for HIV-1 infection in ES individuals below the detection limit of standard assays, suggesting that extraordinary control of infection can occur. The two HIV-infected ES individuals remained healthy and were not superinfected with other HIV-1 strains despite continued high-risk sexual exposures to multiple HIV-infected partners. Understanding the mechanisms that confer diminished replicative capacity of HIV-1 in these hosts is paramount to developing strategies for protection against and control of HIV-1 infection.

Indexed as

HIV Long-Term SurvivorsAmino Acid SequenceCD4-Positive T-LymphocytesDNA, ViralHIV-1HIV Envelope Protein gp120HIV InfectionsHIV SeronegativityHumansMolecular Sequence DataPeptide FragmentsPhylogenyRisk-TakingSequence Analysis, DNASexual PartnersT-Lymphocytes, CytotoxicDNA, ViralHIV Envelope Protein gp120HIV envelope protein gp120 (305-321)Peptide Fragments

Identifiers

PMID12743268
PMCPMC154986

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.