Evidence map›Paper›PMID 12728327›Full record

ArticlePediatric surgery international2003

Gene alteration of intestinal intraepithelial lymphocytes in response to massive small bowel resection.

Barbara E Wildhaber, Hua Yang, Arnold G Coran, Daniel H Teitelbaum

Open access · greenAbstract read
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In one paragraph

Article in Pediatric surgery international, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Modulation of mouse intestinal epithelial cell turnover in the absence of angiotensin converting enzyme.American journal of physiology. Gastrointestinal and liver physiology · 2008
    Article
  7. Article
  8. Article
  9. Advances in short bowel syndrome: an updated review.Pediatric surgery international · 2005
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Barbara E WildhaberDepartment of Surgery, Section of Pediatric Surgery, C.S. Mott Children's Hospital, University of Michigan Medical School, Mott F3970, Box 0245, Ann Arbor, MI 48109, USA.
Hua Yang
Arnold G Coran
Daniel H Teitelbaum
University of Michigan–Ann Arbor · USC. S. Mott Children's Hospital · US

Funding

TPN INDUCED CHANGES IN INTRAEPITHELIAL LYMPHOCYTESR01AI044076 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TEITELBAUM, DANIEL H · 2004 to 2014
$3.2M
TPN INDUCED CHANGES IN INTRAEPITHELIAL LYMPHOCYTESR29AI044076 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TEITELBAUM, DANIEL H · 1999 to 2003
$422k
NIAID NIH HHS AI 44076-01
6 · The paper itself

Abstract

backgroundThe intestinal adaptive response [increased epithelial cell (EC) proliferation and apoptosis] after massive small bowel resection (SBR) is partially controlled by intraepithelial lymphocytes (IEL). To identify IEL factors contributing to EC adaptation post-SBR we utilized microarray assays.

methodsMice underwent a 70% SBR (SBR1w/SBR4w) or sham operation (Sham1w/Sham4w). After 1 or 4 weeks (1w, 4w) small bowel was harvested, and IEL isolated. Determination of the EC-proliferation rate used BrdU incorporation, and of the EC-apoptotic rate used Annexin V staining. Affymetrix system microarrays (12,491 genes) were performed to examine IEL-mRNA expression. Results were considered significant if fold-change (FC) between groups was >2 and P<0.05 (F-test), or FC>3 and 0.05> P >0.01, or FC>4 and P>0.05. Significant genes were confirmed by conventional RT-PCR.

resultsThe SBR EC-proliferation rate increased significantly in both 1w and 4w groups compared to Sham: SBR1w 0.24+/-0.07 vs. Sham1w 0.12+/-0.02 (P=0.03); SBR4w 0.35+/-0.04 vs. Sham4w 0.19+/-0.02 ( P<0.01). The EC-apoptotic rate was unchanged in the 1w group, but significantly differed from controls after 4 weeks: SBR4w 39.92+/-6.78 vs. Sham4w 12.56+/-6.44 ( P<0.01). Microarray results were analyzed to identify potential growth-modifying IEL genes. The following were identified (function in parenthesis; A, apoptosis; P, proliferation): lipocalin 2 (promotes A), angiotensin converting enzyme (increases A), Rap2 interacting protein (reduces A, promotes P), amphiregulin (promotes P) and leucine-rich-alpha2-glycoprotein (promotes A, reduces P). Based on RT-PCR results these genes showed significant changes between groups. The increase in ACE at 1w preceded the observed apoptotic changes. The alterations in lipocalin 2, Rap2 and amphiregulin at 4w coincided with the marked changes in growth and apoptosis in the SBR mice.

conclusionsIEL undergo temporal changes after SBR. These findings provide profound insight into potential IEL-dependent regulation of EC homeostasis post-SBR.

Indexed as

AnimalsApoptosisCell DivisionGene ExpressionIntestinal MucosaIntestine, SmallLymphocyte SubsetsMaleMiceMice, Inbred C57BLModels, AnimalOligonucleotide Array Sequence AnalysisShort Bowel Syndrome

Identifiers

PMID12728327
OpenAlexW2146051625

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.