Evidence map›Paper›PMID 12724533›Full record

ArticleThe Plant cell2003

Rha1, an Arabidopsis Rab5 homolog, plays a critical role in the vacuolar trafficking of soluble cargo proteins.

Eun Ju Sohn, Eol Sun Kim, Min Zhao, Soo Jin Kim, Hyeran Kim, Yong-Woo Kim, Yong Jik Lee, Stefan Hillmer, Uik Sohn, Liwen Jiang and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 198 citations in OpenAlex.

  1. Article
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  8. Characterization of the smallbioRxiv : the preprint server for biology · 2024
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  15. Review
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  19. Article
  20. Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Eun Ju SohnCenter for Plant Intracellular Trafficking, Pohang University of Science and Technology, Korea.
Eol Sun Kim
Min Zhao
Soo Jin Kim
Hyeran Kim
Yong-Woo Kim
Yong Jik Lee
Stefan Hillmer
Uik Sohn
Liwen Jiang
Inhwan Hwang
Pohang University of Science and Technology · KRChinese University of Hong Kong · CNHeidelberg University · DEKyungpook National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rab proteins are members of the Ras superfamily of small GTP binding proteins and play important roles in various intracellular trafficking steps. We investigated the role of Rha1, an Arabidopsis Rab5 homolog, in intracellular trafficking in Arabidopsis protoplasts. In the presence of a dominant-negative mutant of Rha1, soluble vacuolar cargo proteins such as sporamin:green fluorescent protein (Spo:GFP) and Arabidopsis aleurain like protein:GFP are not delivered to the central vacuole; instead, they accumulate as a diffuse or punctate staining pattern within the cell. Spo:GFP at the punctate stains observed in the presence of hemagglutinin:Rha1[S24N] is colocalized with endogenous vacuolar sorting receptor (VSR(At-1)), which is known to localize primarily to the prevacuolar compartment, whereas Spo:GFP in the diffuse pattern is associated with tonoplasts. Furthermore, expression of Rha1[S24N] causes the secretion of a portion of the vacuolar proteins into medium. However, the inhibitory effect of Rha1[S24N] on vacuolar trafficking is relieved partially by coexpressed wild-type Rha1. Based on these results, we propose that Rha1 plays a critical role in the trafficking of soluble cargoes from the prevacuolar compartment to the central vacuole.

Indexed as

ArabidopsisArabidopsis ProteinsBiological TransportGreen Fluorescent ProteinsLuminescent Proteinsrab5 GTP-Binding Proteinsrab GTP-Binding ProteinsRecombinant Fusion ProteinsSequence HomologyTransport VesiclesVacuolesArabidopsis ProteinsGreen Fluorescent ProteinsLuminescent Proteinsrab5 GTP-Binding Proteinsrab GTP-Binding ProteinsRecombinant Fusion ProteinsRha1 protein, Arabidopsis

Identifiers

PMID12724533
PMCPMC153716
OpenAlexW2106996727

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.