Evidence map›Paper›PMID 12724410›Full record

ArticleMolecular and cellular biology2003

Chromosomal elements regulate gene activity and chromatin structure of the human serpin gene cluster at 14q32.1.

Mark D Marsden, R E K Fournier

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Identification of coexpressed gene clusters in a comparative analysis of transcriptome and proteome in mouse tissues.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  5. Article
  6. Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1.Mammalian genome : official journal of the International Mammalian Genome Society · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Mark D MarsdenDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue N., Seattle, WA 98109, USA.
R E K Fournier
Cape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa · ZA

Funding

GENETIC ANALYSIS OF CELL-TYPE-SPECIFIC FUNCTIONSR01GM026449 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI FOURNIER, RAYMOND E · 1985 to 2006
$4.3M
NIGMS NIH HHS GM 26449NIGMS NIH HHS R01 GM026449
6 · The paper itself

Abstract

The human serine protease inhibitor (serpin) gene cluster at 14q32.1 contains a number of genes that are specifically expressed in hepatic cells. Cell-specific enhancers have been identified in several of these genes, but elements involved in locus-wide gene and chromatin control have yet to be defined. To identify regulatory elements in this region, we prepared a series of mutant chromosomal alleles by homologous recombination and transferred the specifically modified human chromosomes to hepatic cells for functional tests. We report that deletion of an 8-kb DNA segment upstream of the human alpha1-antitrypsin gene yields a mutant serpin allele that fails to be activated in hepatic cells. Within this region, a 2.3-kb DNA segment between kb -8.1 and -5.8 contains a previously unrecognized control region that is required not only for serpin gene activation but also for chromatin remodeling of the entire locus.

Indexed as

Chromosomes, Human, Pair 14Allelesalpha 1-AntitrypsinAnimalsChromatinChromosomesDNAGene DeletionHumansKaryotypingLiverMiceModels, GeneticMultigene FamilyNucleic Acid HybridizationPhenotypealpha 1-AntitrypsinChromatinDNASerpins

Identifiers

PMID12724410
PMCPMC164764
OpenAlexW2108235256

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.