Evidence map›Paper›PMID 12719559›Full record

ArticleJournal of virology2003

The highly conserved basic domain I of baculovirus IE1 is required for hr enhancer DNA binding and hr-dependent transactivation.

Victoria A Olson, Justin A Wetter, Paul D Friesen

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

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  5. Identification of the Key Functional Domains ofInternational journal of molecular sciences · 2022
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  12. An inducible system for highly efficient production of recombinant adeno-associated virus (rAAV) vectors in insect Sf9 cells.Proceedings of the National Academy of Sciences of the United States of America · 2009
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Victoria A OlsonInstitute for Molecular Virology and Department of Biochemistry, Graduate School and College of Agricultural and Life Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
Justin A Wetter
Paul D Friesen
University of Wisconsin–Madison · US

Funding

CHARACTERIZATION OF BACULOVIRUS EARLY GENE EXPRESSIONR01AI025557 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI FRIESEN, PAUL D · 1993 to 2008
$2.4M
CHARACTERIZATION OF BACULOVIRUS EARLY GENE EXPRESSIONR29AI025557 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI FRIESEN, PAUL D · 1988 to 1992
–
NIAID NIH HHS AI25557NIAID NIH HHS R01 AI025557
6 · The paper itself

Abstract

The immediate-early protein IE1 is the principal transcriptional regulator of the baculovirus Autographa californica nucleopolyhedrovirus (AcMNPV). Transactivation by IE1 is dramatically stimulated by cis linkage of the affected promoter to AcMNPV homologous region (hr) elements that contain palindromic 28-bp repeats (28-mers) with enhancer activity. This hr-dependent transcriptional enhancement requires binding of the 28-mer by dimeric IE1. Here, we have defined IE1 domains required for this DNA binding in order to investigate the mechanism of IE1 function. Analysis of a panel of IE1 insertion mutations indicated that disruption of a highly conserved domain (residues 152 to 161) consisting of mostly positive-charged residues (basic domain I) abolished hr-dependent transactivation. Targeted mutagenesis of basic residues within basic domain I caused loss of hr-dependent transactivation but had no effect on IE1 oligomerization, nuclear localization, or hr-independent transactivation of viral promoters. Alanine substitutions of K(152) and K(154) or K(160) and K(161) impaired IE1 binding to 28-mer DNA as a homodimer, indicating that these basic residues are required for enhancer binding. Consistent with a DNA-binding defect, 28-mer interaction was improved by heterodimerization with wild-type IE1 or by increasing mutated IE1 concentrations. DNA binding mediated by basic domain I was also required for IE1 transactivation that occurred through physically separated, unlinked hr elements. We concluded that basic domain I is the enhancer-binding domain for IE1. Our data also suggest that DNA binding activates IE1 for transcriptional enhancement, possibly through a conformational change involving basic domain I.

Indexed as

Transcriptional ActivationAmino Acid SequenceAnimalsCell NucleusCells, CulturedConserved SequenceDimerizationDNA-Binding ProteinsDNA, ViralEnhancer Elements, GeneticImmediate-Early ProteinsMolecular Sequence DataMutagenesis, InsertionalMutagenesis, Site-DirectedNucleopolyhedrovirusesPromoter Regions, GeneticAc-IE-1 protein, Autographa californica nucleopolyhedrovirusDNA-Binding ProteinsDNA, ViralImmediate-Early ProteinsTrans-Activators

Identifiers

PMID12719559
PMCPMC153999
OpenAlexW2017762943

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.