Evidence map›Paper›PMID 12719556›Full record

ArticleJournal of virology2003

Transcriptional regulatory properties of Epstein-Barr virus nuclear antigen 3C are conserved in simian lymphocryptoviruses.

Bo Zhao, Rozenn Dalbiès-Tran, Hua Jiang, Ingrid K Ruf, Jeffery T Sample, Fred Wang, Clare E Sample

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Epstein-Barr virus nuclear antigen 3A partially coincides with EBNA3C genome-wide and is tethered to DNA through BATF complexes.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  5. Article
  6. Review
  7. Epstein-Barr virus nuclear antigen 3C regulated genes in lymphoblastoid cell lines.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  8. Epstein-Barr virus nuclear protein EBNA3C residues critical for maintaining lymphoblastoid cell growth.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  9. EBV-encoded EBNA-6 binds and targets MRS18-2 to the nucleus, resulting in the disruption of pRb-E2F1 complexes.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  10. Article
  11. Article
  12. Article
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  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Bo ZhaoDepartment of Biochemistry, St. Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.
Rozenn Dalbiès-Tran
Hua Jiang
Ingrid K Ruf
Jeffery T Sample
Fred Wang
Clare E Sample
University of Tennessee Health Science Center · USSt. Jude Children's Research Hospital · USBrigham and Women's Hospital · USHarvard University · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SUZANNE J. BAKER · 1985 to 2026
$166.9M
PATHOGENESIS OF EPSTEIN BARR VIRUS INFECTIONR01CA068051 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI WANG, FREDERICK C. · 1995 to 2014
$5.8M
FUNCTION OF EBV EBNA-3C IN B CELL IMMORTALIZATIONR01CA056645 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, CLARE E · 1998 to 2008
$1.8M
Regulation of Epstein Barr Virus PersistenceR01CA056639 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, JEFFERY T · 1992 to 2006
$1.6M
ROLE OF EBNA-3A IN EBV-MEDIATED B CELL TRANSFORMATIONR01CA073561 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, CLARE E · 1996 to 2000
$236k
FUNCTIONS OF EBV PROTEINS IN B-CELL IMMORTALIZATIONR29CA056645 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, CLARE E · 1992 to 1996
–
NCI NIH HHS CA21765NCI NIH HHS CA56639NCI NIH HHS CA56645NCI NIH HHS CA68051NCI NIH HHS CA73561NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA056639NCI NIH HHS R01 CA056645NCI NIH HHS R01 CA068051
6 · The paper itself

Abstract

Epstein-Barr virus (EBV) nuclear antigen 3C (EBNA-3C) is a large transcriptional regulator essential for EBV-mediated immortalization of B lymphocytes. We previously identified interactions between EBNA-3C and two cellular transcription factors, J kappa and Spi proteins, through which EBNA-3C regulates transcription. To better understand the contribution of these interactions to EBNA-3C function and EBV latency, we examined whether they are conserved in the homologous proteins of nonhuman primate lymphocryptoviruses (LCVs), which bear a strong genetic and biological similarity to EBV. The homologue of EBNA-3C encoded by the LCV that infects baboons (BaLCV) was found to be only 35% identical in sequence to its EBV counterpart. Of particular significance, this homology localized predominantly to the N-terminal half of the molecule, which encompasses the domains in EBNA-3C that interact with J kappa and Spi proteins. Like EBNA-3C, both BaLCV and rhesus macaque LCV (RhLCV) 3C proteins bound to J kappa and repressed transcription mediated by EBNA-2 through its interaction with J kappa. Both nonhuman primate 3C proteins were also able to activate transcription mediated by the Spi proteins in the presence of EBNA-2. Like EBNA-3C, a domain encompassing the putative basic leucine zipper motif of the BaLCV-3C protein directly interacted with both Spi-1 and Spi-B. Surprisingly, a recently identified motif in EBNA-3C that mediates repression was not identifiable in the BaLCV-3C protein. Finally, although the C terminus of BaLCV-3C bears minimal homology to EBNA-3C, it nonetheless contains a C-terminal domain rich in glutamine and proline that was able to function as a potent transcriptional activation domain, as does the C terminus of EBNA-3C. The conservation of these functional motifs despite poor overall homology among the LCV 3C proteins strongly suggests that the interactions of EBNA-3C with J kappa and Spi do indeed play significant roles in the life cycle of EBV.

Indexed as

Amino Acid SequenceConserved SequenceNuclear ProteinsAnimalsAntigens, ViralBase SequenceB-LymphocytesCell LineCell Transformation, ViralDNA-Binding ProteinsEpstein-Barr Virus Nuclear AntigensGene Expression RegulationHumansImmunoglobulin J Recombination Signal Sequence-Binding ProteinLymphocryptovirusMacaca mulattaAntigens, ViralDNA-Binding ProteinsEBNA-3C, epstein-barr virusEBV-associated membrane antigen, Epstein-Barr virusEpstein-Barr Virus Nuclear AntigensImmunoglobulin J Recombination Signal Sequence-Binding ProteinNuclear ProteinsRBPJ protein, humanSPIB protein, humanTranscription FactorsViral Matrix Proteins

Identifiers

PMID12719556
PMCPMC154039
OpenAlexW2123315809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.