Evidence map›Paper›PMID 12719535›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Mammalian linker-histone subtypes differentially affect gene expression in vivo.

Raouf Alami, Yuhong Fan, Stephanie Pack, Timothy M Sonbuchner, Arnaud Besse, Qingcong Lin, John M Greally, Arthur I Skoultchi, Eric E Bouhassira

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Article
  3. How Human H1 Histone Recognizes DNA.Molecules (Basel, Switzerland) · 2020
    Article
  4. PTEN in Chromatin Remodeling.Cold Spring Harbor perspectives in medicine · 2020
    Review
  5. Review
  6. Review
  7. Epigenetics and autism spectrum disorder: A report of an autism case with mutation in H1 linker histone HIST1H1E and literature review.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2018
    Review
  8. Article
  9. Linker histone H1 and protein-protein interactions.Biochimica et biophysica acta · 2016
    Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Structural insights into the histone H1-nucleosome complex.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Raouf AlamiDepartment of Medicine, Division of Hematology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Yuhong Fan
Stephanie Pack
Timothy M Sonbuchner
Arnaud Besse
Qingcong Lin
John M Greally
Arthur I Skoultchi
Eric E Bouhassira

Funding

STEM CELLS AND GENE THERAPY MODELSP01HL055435 · NHLBI · YESHIVA UNIVERSITY · PI NAGEL, RONALD L · 1995 to 2004
$11.0M
IN VIVO ANALYSIS OF MOUSE H1 HISTONE FUNCTIONR01CA079057 · NCI · YESHIVA UNIVERSITY · PI SKOULTCHI, ARTHUR I · 1998 to 2013
$5.4M
THE RED CELL CYTOSKELETON AND SICKLE CELL DISEASEP60HL038655 · NHLBI · YESHIVA UNIVERSITY · PI FABRY, MARY E · 1988 to 2002
$4.9M
Establishment and maintenance of repressed chromatinR01DK056845 · NIDDK · YESHIVA UNIVERSITY · PI BOUHASSIRA, ERIC E · 2000 to 2008
$2.8M
A High-Throughput Transgenic Mouse Production SystemR21DK061799 · NIDDK · YESHIVA UNIVERSITY · PI BOUHASSIRA, ERIC E · 2001 to 2003
$501k
In Vivo Analysis of Mouse H1 Histone FunctionR56CA079057 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SKOULTCHI, ARTHUR I · 2008 to 2008
$250k
NCI NIH HHS CA79057NCI NIH HHS R01 CA079057NCI NIH HHS R56 CA079057NHLBI NIH HHS HL38655NHLBI NIH HHS HL55435NHLBI NIH HHS P01 HL055435NIDDK NIH HHS DK061799NIDDK NIH HHS DK56845NIDDK NIH HHS R01 DK056845
6 · The paper itself

Abstract

Posttranslational modifications and remodeling of nucleosomes are critical factors in the regulation of transcription. Higher-order folding of chromatin also is likely to contribute to the control of gene expression, but the absence of a detailed description of the structure of the chromatin fiber has impaired progress in this area. Mammalian somatic cells contain a set of H1 linker-histone subtypes, H1 (0) and H1a to H1e, that bind to nucleosome core particles and to the linker DNA between nucleosomes. To determine whether the H1 histone subtypes play differential roles in the regulation of gene expression, we combined mice lacking specific H1 histone subtypes with mice carrying transgenes subject to position effects. Because position effects result from the unique chromatin structure created by the juxtaposition of regulatory elements in the transgene and at the site of integration, transgenes can serve as exquisitely sensitive indicators of chromatin structure. We report that some, but not all, linker histones can attenuate or accentuate position effects. The results suggest that the linker-histone subtypes play differential roles in the control of gene expression and that the sequential arrangement of the linker histones on the chromatin fiber might regulate higher-order chromatin structure and fine-tune expression levels.

Indexed as

Anemia, HemolyticAnimalsBone Marrow CellsErythroid Precursor CellsGene DeletionGene Expression RegulationGlobinsHistonesIn Situ Hybridization, FluorescenceMiceMice, TransgenicPhenylhydrazinesProtein Processing, Post-TranslationalSpleenGlobinsHistonesphenylhydrazinePhenylhydrazines

Identifiers

PMID12719535
PMCPMC156302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.