Evidence map›Paper›PMID 12719473›Full record

ArticleThe Journal of cell biology2003

LST8 negatively regulates amino acid biosynthesis as a component of the TOR pathway.

Esther J Chen, Chris A Kaiser

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 142 citations in OpenAlex.

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  8. HJournal of fungi (Basel, Switzerland) · 2021
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Esther J ChenDept. of Biology, Massachusetts Institute of Technology, 77 Massachusetts Ave., Cambridge, MA 02139, USA.
Chris A Kaiser
Massachusetts Institute of Technology · US

Funding

REGULATED PROTEIN DELIVERY TO THE PLASMA MEMBRANER01GM056933 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KAISER, CHRIS ALAN · 1998 to 2010
$3.1M
NIGMS NIH HHS GM56933NIGMS NIH HHS R01 GM056933
6 · The paper itself

Abstract

LST8, a Saccharomyces cerevisiae gene encoding a 34-kD WD-repeat protein, was identified by mutations that caused defects in sorting Gap1p to the plasma membrane. Here, we report that the Gap1p sorting defect in the lst8-1 mutant results from derepression of Rtg1/3p activity and the subsequent accumulation of high levels of intracellular amino acids, which signal Gap1p sorting to the vacuole. To identify the essential function of Lst8p, we isolated lst8 mutants that are temperature-sensitive for growth. These mutants show hypersensitivity to rapamycin and derepressed Gln3p activity like cells with compromised TOR pathway activity. Like tor2 mutants, lst8 mutants also have cell wall integrity defects. Confirming a role for Lst8p in the TOR pathway, we find that Lst8p associates with both Tor1p and Tor2p and is a peripheral membrane protein that localizes to endosomal or Golgi membranes and cofractionates with Tor1p. Further, we show that a sublethal concentration of rapamycin mimics the Gap1p sorting defect of an lst8 mutant. Finally, the different effects of lst8 alleles on the activation of either the Rtg1/3p or Gln3p transcription factors reveal that these two pathways constitute distinct, genetically separable outputs of the Tor-Lst8 regulatory complex.

Indexed as

Amino Acid Transport SystemsIntracellular Signaling Peptides and ProteinsAmino AcidsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCarrier ProteinsCell Cycle ProteinsCell DivisionCell MembraneCells, CulturedFeedback, PhysiologicalGene Expression Regulation, FungalMutationPhosphatidylinositol 3-KinasesPhosphotransferases (Alcohol Group Acceptor)Protein Transportras GTPase-Activating ProteinsAmino AcidsAmino Acid Transport SystemsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCarrier ProteinsCell Cycle ProteinsGAP1 protein, S cerevisiaeGLN3 protein, S cerevisiaeIntracellular Signaling Peptides and ProteinsLST8 protein, S cerevisiaePhosphatidylinositol 3-KinasesPhosphotransferases (Alcohol Group Acceptor)ras GTPase-Activating ProteinsRepressor ProteinsRTG1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTOR1 protein, S cerevisiaeTOR2 protein, S cerevisiaeTranscription Factors

Identifiers

PMID12719473
PMCPMC2172900
OpenAlexW2024069519

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.