Evidence map›Paper›PMID 12716943›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2003

Leukocyte antigen-related protein tyrosine phosphatase receptor: a small ectodomain isoform functions as a homophilic ligand and promotes neurite outgrowth.

Tao Yang, Ramon Bernabeu, Youmei Xie, Julie S Zhang, Stephen M Massa, Hans C Rempel, Frank M Longo

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  5. LAR Receptor Tyrosine Phosphatase Family in Healthy and Diseased Brain.Frontiers in cell and developmental biology · 2021
    Review
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  12. Leukocyte common antigen-related phosphatase is a functional receptor for chondroitin sulfate proteoglycan axon growth inhibitors.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Tao YangDepartment of Neurology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Ramon Bernabeu
Youmei Xie
Julie S Zhang
Stephen M Massa
Hans C Rempel
Frank M Longo
Neurology, Inc · USUniversity of North Carolina at Chapel Hill · USUniversity of California, San Francisco · US

Funding

NOVEL LAR ISOFORMS--A NEW CLASS OF NEUTROPHIC AGENTSR01AG009873 · NIA · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI LONGO, FRANK M · 1991 to 2003
$1.2M
NIA NIH HHS R01 AG009873NIA NIH HHS R01 AG09873
6 · The paper itself

Abstract

The identities of ligands interacting with protein tyrosine phosphatase (PTP) receptors to regulate neurite outgrowth remain mainly unknown. Analysis of cDNA and genomic clones encoding the rat leukocyte common antigen-related (LAR) PTP receptor predicted a small, approximately 11 kDa ectodomain isoform, designated LARFN5C, containing a novel N terminal followed by a C-terminal segment of the LAR fifth fibronectin type III domain. RT-PCR and Northern blot analysis confirmed the presence of LARFN5C transcripts in brain. Transfection of COS cells with LARFN5C-Fc cDNA resulted in expression of the predicted protein, and Western blot analysis verified expression of approximately 11 kDa LARFN5C protein in vivo and its developmental regulation. Beads coated with rLARFN5C demonstrated aggregation consistent with homophilic binding, and pull-down and immunoprecipitation assays demonstrated that rLARFN5C associates with the LAR receptor. rLARFN5C binding to COS cells was dependent on LAR expression, and rLARFN5C binding to LAR +/+ hippocampal neurons was fivefold greater than that found by using LAR-deficient (-/-) neurons. Substratum-bound rLARFN5C had potent neurite-promoting effects on LAR +/+ neurons, with a fivefold loss in potency with the use of LAR -/- neurons. rLARFN5C in solution at low nanomolar concentrations inhibited neurite outgrowth induced by substratum-bound rLARFN5C, consistent with receptor-based function. These studies suggest that a small ectodomain isoform of a PTP receptor can function as a ligand for the same receptor to promote neurite outgrowth.

Indexed as

Alternative SplicingAnimalsBrainCell AdhesionCells, CulturedCOS CellsDose-Response Relationship, DrugGene Expression Regulation, DevelopmentalHippocampusLigandsMiceMice, KnockoutMicrospheresNerve Tissue ProteinsNeuritesNeuronsLigandsNerve Tissue ProteinsProtein IsoformsProtein Tyrosine PhosphatasesPTPRF protein, humanPtprf protein, mousePtprf protein, ratReceptor-Like Protein Tyrosine Phosphatases, Class 2Receptors, Cell Surface

Identifiers

PMID12716943
PMCPMC6742305
OpenAlexW2169801847

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.