Evidence map›Paper›PMID 12711691›Full record

ArticleNucleic acids research2003

Stimulation of human DNA polymerase epsilon by MDM2.

Hitomi Asahara, Ying Li, Jill Fuss, Dale S Haines, Nikolina Vlatkovic, Mark T Boyd, Stuart Linn

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. MDM2's social network.Oncogene · 2014
    Review
  10. The MDM2-p53 pathway revisited.Journal of biomedical research · 2013
    Article
  11. Functional analysis of Drosophila DNA polymerase ε p58 subunit.American journal of cancer research · 2013
    Article
  12. Article
  13. Article
  14. Article
  15. DNA polymerase epsilon: a polymerase of unusual size (and complexity).Progress in nucleic acid research and molecular biology · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hitomi AsaharaDivision of Biochemistry and Molecular Biology, Barker Hall, University of California, Berkeley, CA 94720-3202, USA.
Ying Li
Jill Fuss
Dale S Haines
Nikolina Vlatkovic
Mark T Boyd
Stuart Linn
University of California, Berkeley · US

Funding

FUNCTION OF HUMAN DAMAGED DNA BINDING PROTEIN (DDB)R01GM059424 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LINN, STUART M · 2000 to 2007
$2.8M
FUNCTIONAL ANALYSIS OF MDM2 OVEREXPRESSIONR29CA070165 · NCI · TEMPLE UNIVERSITY · PI HAINES, DALE S · 1997 to 2001
$207k
STUDIES OF DNA POLYMERASESR01GM030415 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LINN, STUART M · 1985 to 1999
–
NCI NIH HHS 1R29CA70165NIEHS NIH HHS P30ES08196NIGMS NIH HHS 1R01GM30415NIGMS NIH HHS 1R01GM59424NIGMS NIH HHS R01 GM059424
6 · The paper itself

Abstract

The human DNA polymerase epsilon catalytic subunit consists of a 140-kDa N-terminal domain that contains the catalytic activity and a 120-kDa C-terminal domain that binds to the other subunits and to exogenous peptides, including PCNA and MDM2. We report here that recombinant human MDM2 purified from insect cells or Escherichia coli stimulated the activity of DNA polymerase epsilon up to 10- and 40-fold, respectively, but not those of DNA polymerase beta or Klenow fragment of E.coli DNA polymerase I. Kinetic studies indicated that MDM2 increased the maximum velocity of the reaction, but did not change substrate affinities. The stimulation depended upon the interaction of the N-terminal 166 amino acid residues of MDM2 with the C-terminal domain of the full-length catalytic subunit, since the deletion of 166 amino acids from N-terminal of MDM2 or the removal of the C-terminal domain of DNA polymerase epsilon by trypsin digestion or competition for binding to it by the addition of excess C-terminal fragment eliminated the stimulation. Since DNA polymerase epsilon appears to be involved in DNA replication, recombination and repair synthesis, we suggest that MDM2 binding to DNA polymerase epsilon might be part of a reconfiguration process that allows DNA polymerase epsilon to associate with repair/recombination proteins in response to DNA damage.

Indexed as

Nuclear ProteinsAnimalsCell LineDNA Polymerase IIEnzyme ActivationHeLa CellsHumansKineticsPeptide FragmentsProtein BindingProto-Oncogene ProteinsProto-Oncogene Proteins c-mdm2Recombinant ProteinsSpodopteraSubstrate SpecificityDNA Polymerase IIMDM2 protein, humanNuclear ProteinsPeptide FragmentsProto-Oncogene ProteinsProto-Oncogene Proteins c-mdm2Recombinant Proteins

Identifiers

PMID12711691
PMCPMC154228
OpenAlexW1945473077

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.