Evidence map›Paper›PMID 12708478›Full record

ArticleCancer science2003

Global and non-random CpG-island methylation in gastric carcinoma associated with Epstein-Barr virus.

Ja-Mun Chong, Kazuya Sakuma, Makoto Sudo, Tetsuo Ushiku, Hiroshi Uozaki, Junji Shibahara, Hideo Nagai, Nobuaki Funata, Hirokazu Taniguchi, Hiroyuki Aburatani and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer science, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. DNA Methyltransferases: From Evolution to Clinical Applications.International journal of molecular sciences · 2022
    Review
  6. Oncogenic Viruses as Entropic Drivers of Cancer Evolution.Frontiers in virology (Lausanne, Switzerland) · 2021
    Article
  7. Review
  8. Review
  9. Microbiome in human cancers.Access microbiology · 2021
    Review
  10. Review
  11. Review
  12. Review
  13. EBV-associated gastric cancer evades T-cell immunity by PD-1/PD-L1 interactions.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2019
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Ja-Mun ChongDepartment of Pathology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033. jmchong-tky@umin.ac.jp
Kazuya Sakuma
Makoto Sudo
Tetsuo Ushiku
Hiroshi Uozaki
Junji Shibahara
Hideo Nagai
Nobuaki Funata
Hirokazu Taniguchi
Hiroyuki Aburatani
Masashi Fukayama
Graduate School USA · USThe University of Tokyo · JPJichi Medical University · JPTokyo Metropolitan Komagome Hospital · JPUniversity of Yamanashi Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA hypermethylation may play a primary role in the genesis of Epstein-Barr virus (EBV)-associated gastric carcinoma (GC) (EBVaGC). Methylation-specific PCR targeting CpG-islands demonstrated markedly increased methylation of specific genes, such as p14, p15 and p16 genes, in EBVaGC in vivo. A high frequency of methylation was observed in an EBVaGC strain of severe combined immunodeficiency mice, and the expression of methylated genes in the strain was apparently lower than the expression of the unmethylated genes in EBV-negative GC strains. Although over-expression of DNA methyltransferases (DNMTs) is known to be associated with some human cancers, real-time PCR demonstrated that DNMTs expression was suppressed in EBVaGC. The DNA methylation of specific genes, independently of DNMTs expression, may be important in the development of EBVaGC.

Indexed as

CpG IslandsDNA MethylationAdultAgedAged, 80 and overCarcinomaCell Transformation, NeoplasticCell Transformation, ViralDNA (Cytosine-5-)-MethyltransferasesDNA, NeoplasmEpstein-Barr Virus InfectionsFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Expression Regulation, ViralGenes, Tumor SuppressorDNA (Cytosine-5-)-MethyltransferasesDNA, NeoplasmNeoplasm Proteins

Identifiers

PMID12708478
PMCPMC11160188
OpenAlexW2035542544

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.