Evidence map›Paper›PMID 12697833›Full record

ArticleMolecular and cellular biology2003

A 1-megadalton ESC/E(Z) complex from Drosophila that contains polycomblike and RPD3.

Feng Tie, Jayashree Prasad-Sinha, Anna Birve, Asa Rasmuson-Lestander, Peter J Harte

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In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 130 citations in OpenAlex.

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  14. Polycomb inhibits histone acetylation by CBP by binding directly to its catalytic domain.Proceedings of the National Academy of Sciences of the United States of America · 2016
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  19. A dimeric state for PRC2.Nucleic acids research · 2014
    Article
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3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Feng TieDepartment of Genetics, Case Western Reserve University, Cleveland, Ohio 44106, USA.
Jayashree Prasad-Sinha
Anna Birve
Asa Rasmuson-Lestander
Peter J Harte
Case Western Reserve University · USUmeå University · SE

Funding

MOLECULAR BASIS OF HOMEOTIC GENE REGULATIONR01GM039255 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HARTE, PETER J. · 1988 to 2020
$7.1M
NIGMS NIH HHS GM39255NIGMS NIH HHS R01 GM039255
6 · The paper itself

Abstract

Polycomb group (PcG) proteins are required to maintain stable repression of the homeotic genes and others throughout development. The PcG proteins ESC and E(Z) are present in a prominent 600-kDa complex as well as in a number of higher-molecular-mass complexes. Here we identify and characterize a 1-MDa ESC/E(Z) complex that is distinguished from the 600-kDa complex by the presence of the PcG protein Polycomblike (PCL) and the histone deacetylase RPD3. In addition, the 1-MDa complex shares with the 600-kDa complex the histone binding protein p55 and the PcG protein SU(Z)12. Coimmunoprecipitation assays performed on embryo extracts and gel filtration column fractions indicate that, during embryogenesis E(Z), SU(Z)12, and p55 are present in all ESC complexes, while PCL and RPD3 are associated with ESC, E(Z), SU(Z)12, and p55 only in the 1-MDa complex. Glutathione transferase pulldown assays demonstrate that RPD3 binds directly to PCL via the conserved PHD fingers of PCL and the N terminus of RPD3. PCL and E(Z) colocalize virtually completely on polytene chromosomes and are associated with a subset of RPD3 sites. As previously shown for E(Z) and RPD3, PCL and SU(Z)12 are also recruited to the insertion site of a minimal Ubx Polycomb response element transgene in vivo. Consistent with these biochemical and cytological results, Rpd3 mutations enhance the phenotypes of Pcl mutants, further indicating that RPD3 is required for PcG silencing and possibly for PCL function. These results suggest that there may be multiple ESC/E(Z) complexes with distinct functions in vivo.

Indexed as

Chromosomal Proteins, Non-HistoneHomeodomain ProteinsAnimalsAnimals, Genetically ModifiedBinding SitesCarrier ProteinsChromosome MappingDNA-Binding ProteinsDrosophilaDrosophila ProteinsEmbryo, NonmammalianFemaleHistone Deacetylase 1Histone DeacetylasesHistone-Lysine N-MethyltransferaseMacromolecular SubstancesCarrier ProteinsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDrosophila Proteinsesc protein, DrosophilaE(z) protein, DrosophilaHDAC1 protein, DrosophilaHistone Deacetylase 1Histone DeacetylasesHistone-Lysine N-MethyltransferaseHomeodomain ProteinsMacromolecular SubstancesNuclear ProteinsPcl protein, DrosophilaPc protein, DrosophilaPolycomb Repressive Complex 1Polycomb Repressive Complex 2Repressor ProteinsSu(z)12 protein, DrosophilaTranscription FactorsUbx protein, Drosophila

Identifiers

PMID12697833
PMCPMC153183
OpenAlexW2132880451

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.