Evidence map›Paper›PMID 12690126›Full record

ArticleSexually transmitted infections2003

LCR testing for gonorrhoea and chlamydia in population surveys and other screenings of low prevalence populations: coping with decreased positive predictive value.

J M Zenilman, W C Miller, C Gaydos, S M Rogers, C F Turner

Open access · bronzeAbstract read
In one paragraph

Article in Sexually transmitted infections, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Asymptomatic men: should they be tested for urethritis?Sexually transmitted infections · 2007
    Article
  9. Article
  10. Article
  11. Gonorrhea Update.Current infectious disease reports · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

J M ZenilmanInfectious Diseases Division Johns Hopkins University School of Medicine, Baltimore, MD, USA. jzenilma@jhmi.edu
W C Miller
C Gaydos
S M Rogers
C F Turner
Johns Hopkins Medicine · US

Funding

CLINICAL RESEARCH IN STDSK24AI001633 · NIAID · JOHNS HOPKINS UNIVERSITY · PI ZENILMAN, JONATHAN M · 1999 to 2007
$832k
SURVEY MEASUREMENT OF SENSITIVE BEHAVIORS USING A-CASIR01HD031067 · NICHD · RESEARCH TRIANGLE INSTITUTE · PI TURNER, CHARLES F · 1993 to 1998
–
IMPROVING AIDS BEHAVIORAL STUDIES USING T-ACASIR01MH056318 · NIMH · RESEARCH TRIANGLE INSTITUTE · PI TURNER, CHARLES F · 1996 to 1997
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JOHNS HOPKINS SEXUALLY TRANSMITTED DISEASES--CRCU19AI038533 · NIAID · JOHNS HOPKINS UNIVERSITY · PI KOTLOFF, KAREN · 1995 to 1998
–
NCRR NIH HHS RR00046NIAID NIH HHS K24-AI01633NIAID NIH HHS U19-AI38533NICHD NIH HHS R01-HD31067NIMH NIH HHS R01-MH56318
6 · The paper itself

Abstract

objectiveNucleic acid amplification tests have facilitated field based STD studies and increased screening activities. However, even with highly specific tests, the positive predictive value (PPV) of such tests may be lower than desirable in low prevalence populations. We estimated PPVs for a single LCR test in a population survey in which positive specimens were retested.

methodsThe Baltimore STD and Behavior Survey (BSBS) was a population based behavioural survey of adults which included collecting urine specimens to assess the prevalence of gonorrhoea and chlamydial infection. Gonorrhoea and chlamydial infection were diagnosed by ligase chain reaction (LCR). Nearly all positive results were retested by LCR. Because of cost considerations, negative results were not confirmed. Predicted curves for the PPV were calculated for a single testing assuming an LCR test sensitivity of 95%, and test specificities in the range 95.0%-99.9%, for disease prevalences between 1% and 10%. Positive specimens were retested to derive empirical estimates of the PPV of a positive result on a single LCR test.

results579 participants age 18-35 provided urine specimens. 20 (3.5%) subjects initially tested positive for chlamydial infection, and 39 (6.7%) tested positive for gonococcal infection. If positive results on the repeat LCR are taken as confirmation of a "true" infection, the observed PPV for the first LCR testing was 89.5% for chlamydial infection and 83.3% for gonorrhoea. This is within the range of theoretical PPVs calculated from the assumed sensitivities and specificities of the LCR assays.

conclusionsEmpirical performance of a single LCR testing approximated the theoretically predicted PPV in this field study. This result demonstrates the need to take account of the lower PPVs obtained when such tests are used in field studies or clinical screening of low prevalence populations. Repeat testing of specimens, preferably with a different assay (for example, polymerase chain reaction), and disclosure of the non-trivial potential for false positive test results would seem appropriate in all such studies.

Indexed as

AdolescentAdultBaltimoreChlamydia InfectionsFemaleGonorrheaHealth SurveysHumansLigase Chain ReactionMaleMass ScreeningMiddle AgedPredictive Value of TestsPrevalenceSensitivity and Specificity

Identifiers

PMID12690126
PMCPMC1744623
OpenAlexW2132491174

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.