Evidence map›Paper›PMID 12684530›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Phage HK022 Nun protein represses translation of phage lambda N (transcription termination/translation repression).

Hyeong C Kim, Jian-guang Zhou, Helen R Wilson, Grigoriy Mogilnitskiy, Donald L Court, Max E Gottesman

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. RNA polymerase elongation factors.Annual review of microbiology · 2008
    Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Hyeong C KimDepartment of Biochemistry and Molecular Biophysics, and Institute of Cancer Research, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Jian-guang Zhou
Helen R Wilson
Grigoriy Mogilnitskiy
Donald L Court
Max E Gottesman
Columbia University · USNational Cancer Institute · USNational Institutes of Health · US

Funding

CONTROL OF TRANSCRIPTION TERMINATION IN E. COLIR01GM037219 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GOTTESMAN, MAX ELLIOT · 1986 to 2017
$6.6M
Control of Transcription Termination in E. coliR56GM037219 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GOTTESMAN, MAX ELLIOT · 2009 to 2009
$399k
Regulation of Gene Expression and the Cell CycleZ01BC010335 · BC · BASIC SCIENCES · PI COURT, DONALD · 2000 to 2004
–
NIGMS NIH HHS GM37219NIGMS NIH HHS R01 GM037219NIGMS NIH HHS R56 GM037219
6 · The paper itself

Abstract

The N-terminal arginine-rich motif of phage HK022 Nun protein binds to NUT sequences in phage lambda nascent transcripts and induces transcription termination. Interactions between the Nun C terminus and RNA polymerase as well as the DNA template are required for termination. We have isolated Nun C-terminal point and deletion mutants that are unable to block transcription. The mutants bind NUT RNA and inhibit translation of the lambda N gene. Thus HK022 excludes lambda both by terminating transcription on the phage chromosome and by preventing translation of the essential lambda N gene. Like N autoregulation, translation repression by Nun requires host RNaseIII deficiency (rnc) or a mutation in the RNaseIII processing site (rIII) located between NUTL and the beginning of the N coding sequence. Our data support the idea that Nun bound at NUTL causes steric interference with ribosome attachment to the nearby N coding sequence. Two models, Nun acting alone or in complex with host proteins, are discussed.

Indexed as

Protein BiosynthesisTerminator Regions, GeneticBacteriophage lambdaBase SequenceDNA PrimersMutationNucleic Acid ConformationRNA, MessengerViral ProteinsDNA PrimersRNA, MessengerViral Proteins

Identifiers

PMID12684530
PMCPMC154341
OpenAlexW2032612888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.