Evidence map›Paper›PMID 12682181›Full record

ArticleJournal of clinical microbiology2003

DNase pretreatment of master mix reagents improves the validity of universal 16S rRNA gene PCR results.

Alexandra Heininger, Marlies Binder, Andreas Ellinger, Konrad Botzenhart, Klaus Unertl, Gerd Döring

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 55 citations in OpenAlex.

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  8. Non-culture-based methods to diagnose bloodstream infection: Does it work?European journal of microbiology & immunology · 2013
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  17. A broad-range PCR technique for the diagnosis of infective endocarditis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alexandra HeiningerKlinik für Anästhesiologie und Transfusionsmedizin, Abteilung für Anästhesiologie, Eberhard-Karls-Universität Tübingen, D-72074 Tübingen, Germany.
Marlies Binder
Andreas Ellinger
Konrad Botzenhart
Klaus Unertl
Gerd Döring
Deutsche Gesellschaft für Anästhesiologie und Intensivmedizin · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNase I pretreatment of 16S rRNA gene PCR reagents was tested. The DNase I requirement for the elimination of false-positive results varied between 0.1 and 70 IU per master mix depending on the applied Taq polymerase. PCR sensitivity was mostly maintained when 0.1 IU of DNase I was used.

Indexed as

Genes, rRNADeoxyribonuclease IDNA, BacterialDNA PrimersEscherichia coliFalse Positive ReactionsPolymerase Chain ReactionReproducibility of ResultsRNA, Ribosomal, 16SSensitivity and SpecificityTaq PolymeraseDeoxyribonuclease IDNA, BacterialDNA PrimersRNA, Ribosomal, 16STaq Polymerase

Identifiers

PMID12682181
PMCPMC153871
OpenAlexW2144714098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.