Evidence map›Paper›PMID 12676893›Full record

ArticleJournal of medical genetics2003

Origins and frequencies of SLC26A4 (PDS) mutations in east and south Asians: global implications for the epidemiology of deafness.

H-J Park, S Shaukat, X-Z Liu, S H Hahn, S Naz, M Ghosh, H-N Kim, S-K Moon, S Abe, K Tukamoto and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 145 papers.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

145 citing papers in PubMed, 320 citations in OpenAlex.

  1. Trial
  2. Article
  3. A UniqueInternational journal of molecular sciences · 2026
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  7. Treating Hearing Loss: From Cochlear Implantation to Gene Therapy.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  8. Reevaluation of Enlarged Vestibular Aqueduct.JAMA otolaryngology-- head & neck surgery · 2025
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  11. Research hotspots and trends of theIntractable & rare diseases research · 2025
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  12. Article
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  15. Article
  16. Article
  17. Review
  18. Functional Studies of Deafness-Associated Pendrin and Prestin Variants.International journal of molecular sciences · 2024
    Article
  19. Article
  20. Article

85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 6 countries.

H-J ParkSection on Gene Structure and Function, National Institutes of Health, Rockville, Maryland 20850, USA.
S Shaukat
X-Z Liu
S H Hahn
S Naz
M Ghosh
H-N Kim
S-K Moon
S Abe
K Tukamoto
S Riazuddin
M Kabra
R Erdenetungalag
J Radnaabazar
S Khan
A Pandya
S-I Usami
W E Nance
E R Wilcox
S Riazuddin
A J Griffith
National Human Genome Research Institute · USUniversity of the Punjab · PKAll India Institute of Medical Sciences · INInner Mongolia Maternal and Child Health · CNNational Institutes of Health · USShinshu University · JPVirginia Commonwealth University Medical Center · USAjou University · KRHirosaki University · JPMayo Clinic · USUniversity of Miami · USYonsei University · KR

Funding

Molecular Genetics on Non Syndromic Hearing Loss (NSHL)R01DC005575 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2001 to 2024
$10.6M
Sensory disorders in COVID -19 as an early identifier and healthcare worker protectionR01DC012115 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2013 to 2022
$7.2M
Molecular Analysis Of Human Hereditary DeafnessZ01DC000060 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI GRIFFITH, ANDREW J · 2001 to 2008
$3.0M
CREATION OF A DNA REPOSITORY TO IDENTIFY DEAFNESS GENESR01DC004293 · NIDCD · VIRGINIA COMMONWEALTH UNIVERSITY · PI NANCE, WALTER ELMORE · 2000 to 2004
$2.4M
GENETIC STUDIES OF NONSYNDROMIC DEAFNESSR01DC002530 · NIDCD · VIRGINIA COMMONWEALTH UNIVERSITY · PI NANCE, WALTER ELMORE · 1997 to 2001
$871k
NIDCD NIH HHS R01 DC005575NIDCD NIH HHS R01 DC012115NIDCD NIH HHS R01 DC 02530NIDCD NIH HHS R01 DC 04293NIDCD NIH HHS R01 DC 05575
6 · The paper itself

Abstract

Recessive mutations of SLC26A4 (PDS) are a common cause of Pendred syndrome and non-syndromic deafness in western populations. Although south and east Asia contain nearly one half of the global population, the origins and frequencies of SLC26A4 mutations in these regions are unknown. We PCR amplified and sequenced seven exons of SLC26A4 to detect selected mutations in 274 deaf probands from Korea, China, and Mongolia. A total of nine different mutations of SLC26A4 were detected among 15 (5.5%) of the 274 probands. Five mutations were novel and the other four had seldom, if ever, been identified outside east Asia. To identify mutations in south Asians, 212 Pakistani and 106 Indian families with three or more affected offspring of consanguineous matings were analysed for cosegregation of recessive deafness with short tandem repeat markers linked to SLC26A4. All 21 SLC26A4 exons were PCR amplified and sequenced in families segregating SLC26A4 linked deafness. Eleven mutant alleles of SLC26A4 were identified among 17 (5.4%) of the 318 families, and all 11 alleles were novel. SLC26A4 linked haplotypes on chromosomes with recurrent mutations were consistent with founder effects. Our observation of a diverse allelic series unique to each ethnic group indicates that mutational events at SLC26A4 are common and account for approximately 5% of recessive deafness in south Asians and other populations.

Indexed as

Membrane Transport ProteinsAsia, SoutheasternCarrier ProteinsChromosomes, Human, Pair 7DeafnessDNADNA Mutational AnalysisFamily HealthFemaleGene FrequencyGenes, RecessiveHaplotypesHumansKoreaMaleMutationCarrier ProteinsDNAMembrane Transport ProteinsSLC26A4 protein, humanSulfate Transporters

Identifiers

PMID12676893
PMCPMC1735432
OpenAlexW2148872965

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.