Evidence map›Paper›PMID 12670867›Full record

ArticleGenes & development2003

In vivo analysis of a developmental circuit for direct transcriptional activation and repression in the same cell by a Runx protein.

Jude Canon, Utpal Banerjee

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Tle corepressors are differentially partitioned to instruct CD8The Journal of experimental medicine · 2018
    Article
  6. The Role of Runx1 in Embryonic Blood Cell Formation.Advances in experimental medicine and biology · 2017
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Is Runx a linchpin for developmental signaling in metazoans?Journal of cellular biochemistry · 2009
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jude CanonDepartment of Biological Chemistry and Department of Molecular, Cell, and Developmental Biology, Molecular Biology Institute, University of California-Los Angeles, Los Angeles, CA 90095, USA.
Utpal Banerjee
University of California, Los Angeles · US

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Signaling and Metabolic Control in the Drosophila EyeR01EY008152 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BANERJEE, UTPAL · 1990 to 2015
$6.7M
NEI NIH HHS EY 08152NEI NIH HHS R01 EY008152NIGMS NIH HHS GM 07185NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

Runx proteins have been implicated in acute myeloid leukemia, cleidocranial dysplasia, and stomach cancer. These proteins control key developmental processes in which they function as both transcriptional activators and repressors. How these opposing regulatory modes can be accomplished in the in vivo context of a cell has not been clear. In this study we use the developing cone cell in the Drosophila visual system to elucidate the mechanism of positive and negative regulation by the Runx protein Lozenge (Lz). We describe a regulatory circuit in which Lz causes transcriptional activation of the homeodomain protein Cut, which can then stabilize a Lz repressor complex in the same cell. Whether a gene is activated or repressed is determined by whether the Lz activator or the repressor complex binds to its upstream sequence. This study provides a mechanistic basis for the dual function of Runx proteins that is likely to be conserved in mammalian systems.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsAnimals, Genetically ModifiedBase SequenceBinding SitesCell LineDNA-Binding ProteinsDNA ProbesDrosophila melanogasterDrosophila ProteinsHomeodomain ProteinsInsect HormonesNerve Tissue ProteinsNuclear ProteinsRepressor ProteinsTranscriptional Activationct protein, DrosophilaDNA-Binding ProteinsDNA ProbesDrosophila ProteinsHomeodomain ProteinsInsect Hormoneslz protein, DrosophilaNerve Tissue ProteinsNuclear ProteinsRepressor ProteinsTranscription Factors

Identifiers

PMID12670867
PMCPMC196027
OpenAlexW2016782673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.