Evidence map›Paper›PMID 12660814›Full record

ArticleOncogene2003

Subtractive immunization using highly metastatic human tumor cells identifies SIMA135/CDCP1, a 135 kDa cell surface phosphorylated glycoprotein antigen.

John D Hooper, Andries Zijlstra, Ronald T Aimes, Hongyan Liang, Gisela F Claassen, David Tarin, Jacqueline E Testa, James P Quigley

Registry-linked trialAbstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04708444 (Prognostic Value of CD318 in Acute Myeloid Leukemia Patients at Assiut University Hospital), which is not on this map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04708444 unknown statusnot on this mapstarted 2021, after this paper: background citation

Prognostic Value of CD318 in Acute Myeloid Leukemia Patients at Assiut University Hospital

TypeobservationalSponsorShimaa Arafa IbrahimRan2021 to 2023Enrolled100ConditionsAcute Myeloid LeukemiaArmsCD318
3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
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  3. Functional significance of miR-218 in lung cancer.Journal of cancer metastasis and treatment · 2026
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  19. Theranostic Targeting of CUB Domain Containing Protein 1 (CDCP1) in Pancreatic Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2020
    Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

John D HooperDepartment of Cell Biology, The Scripps Research Intitute, La Jolla, CA 92037, USA.
Andries Zijlstra
Ronald T Aimes
Hongyan Liang
Gisela F Claassen
David Tarin
Jacqueline E Testa
James P Quigley
Scripps Research Institute · USSanford Burnham Prebys Medical Discovery Institute · USUniversity of California, San Diego · US

Funding

THROMBUS FORMATION IN BABOONSP01HL031950 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, JOHN H · 1985 to 2015
$29.4M
BLOOD SYSTEMS IN COAGULATION AND VESSEL DISEASET32HL007195 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI RUF, WOLFRAM · 1985 to 2011
$5.1M
VASCULAR BIOLOGY, THROMBOSIS, AND HEMOSTASIST32HL007695 · NHLBI · SCRIPPS RESEARCH INSTITUTE · PI QUIGLEY, JAMES P · 1991 to 2005
$1.9M
SURFACE MOLECULES FUNCTIONALLY INVOLVED IN METASTASISR01CA065660 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI QUIGLEY, JAMES P · 1997 to 2001
$539k
NCI NIH HHS CA65660NHLBI NIH HHS HL31950NHLBI NIH HHS T32 HL07195NHLBI NIH HHS T32 HL07695
6 · The paper itself

Abstract

We have previously used a subtractive immunization (SI) approach to generate monoclonal antibodies (mAbs) against proteins preferentially expressed by the highly metastatic human epidermoid carcinoma cell line, M(+)HEp3. Here we report the immunopurification, identification and characterization of SIMA135/CDCP1 (subtractive immunization M(+)HEp3 associated 135 kDa protein/CUB domain containing protein 1) using one of these mAbs designated 41-2. Protein expression levels of SIMA135/CDCP1 correlated with the metastatic ability of variant HEp3 cell lines. Protein sequence analysis predicted a cell surface location and type I orientation of SIMA135/CDCP1, which was confirmed directly by immunocytochemistry. Analysis of deglycosylated cell lysates indicated that up to 40 kDa of the apparent molecular weight of SIMA135/CDCP1 is because of N-glycosylation. Western blot analysis using a antiphosphotyrosine antibody demonstrated that SIMA135/CDCP1 from HEp3 cells is tyrosine phosphorylated. Selective inhibitor studies indicated that an Src kinase family member is involved in the tyrosine phosphorylation of the protein. In addition to high expression in M(+)HEp3 cells, the SIMA135/CDCP1 protein is expressed to varying levels in 13 other human tumor cell lines, manifesting only a weak correlation with the reported metastatic ability of these tumor cell lines. The protein is not detected in normal human fibroblasts and endothelial cells. Northern blot analysis indicated that SIMA135/CDCP1 mRNA has a restricted expression pattern in normal human tissues with highest levels of expression in skeletal muscle and colon. Immunohistochemical analysis indicated apical and basal plasma membrane expression of SIMA135/CDCP1 in epithelial cells in normal colon. In colon tumor, SIMA135/CDCP1 expression appeared dysregulated showing extensive cell surface as well as cytoplasmic expression. Consistent with in vitro shedding experiments on HEp3 cells, SIMA135/CDCP1 was also detected within the lumen of normal and cancerous colon crypts, suggesting that protein shedding may occur in vivo. Thus, specific immunodetection followed by proteomic analysis allows for the identification and partial characterization of a heretofore uncharacterized human cell surface antigen.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalAntigens, CDAntigens, NeoplasmBase SequenceCell Adhesion MoleculesDNA PrimersHumansImmunohistochemistryMolecular Sequence DataNeoplasm MetastasisNeoplasm ProteinsPhosphorylationSubtraction TechniqueTumor Cells, CulturedAntibodies, MonoclonalAntigens, CDAntigens, NeoplasmCDCP1 protein, humanCell Adhesion MoleculesDNA PrimersNeoplasm Proteins

Identifiers

PMID12660814
OpenAlexW1989359033

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.