Evidence map›Paper›PMID 12660165›Full record

ArticleThe EMBO journal2003

Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast.

Carine Ganem, Frédéric Devaux, Claire Torchet, Claude Jacq, Sophie Quevillon-Cheruel, Gilles Labesse, Céline Facca, Gérard Faye

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 124 citations in OpenAlex.

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  12. Ssu72 Dual-Specific Protein Phosphatase: From Gene to Diseases.International journal of molecular sciences · 2021
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Carine GanemInstitut Curie-CNRS UMR2027, Bât. 110, Centre Universitaire, 91405 Orsay, France.
Frédéric Devaux
Claire Torchet
Claude Jacq
Sophie Quevillon-Cheruel
Gilles Labesse
Céline Facca
Gérard Faye
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ssu72 is an essential yeast protein that is involved in transcription. It physically interacts with transcription initiation and termination complexes. In this report, we provide evidence that Ssu72 is a phosphatase that physically interacts with the CTD kinase Kin28 and functionally interacts with the CTD phosphatase Fcp1. A genome-wide expression analysis of mutant ssu72-ts69 during growth in complete medium revealed a number of defects, including the accumulation of a limited number of mRNAs and the read-through transcription of small nucleolar RNAs and of some mRNAs. We hypothesize that Ssu72 plays a key role in the transcription termination of certain transcripts, possibly by promoting RNA polymerase pausing and release. The possibility that the CTD of the largest subunit of RNA polymerase II is a substrate of Ssu72 is discussed.

Indexed as

Terminator Regions, GeneticAmino Acid SequenceBase SequenceCarrier ProteinsDNA PrimersModels, MolecularMolecular Sequence DatamRNA Cleavage and Polyadenylation FactorsMutagenesis, Site-DirectedMutationPhosphoprotein PhosphatasesPhosphorylationRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence Homology, Amino AcidCarrier ProteinsDNA PrimersmRNA Cleavage and Polyadenylation FactorsPhosphoprotein PhosphatasesRNA, MessengerSaccharomyces cerevisiae ProteinsSSU72 protein, S cerevisiae

Identifiers

PMID12660165
PMCPMC152886
OpenAlexW2160871692

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.